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Miguel Vazquez
Miguel Vazquez
Barcelona Supercomputing Center - Spanish National HPC
Verified email at bsc.es
Title
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Cited by
Year
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia
V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ...
Nature genetics 44 (1), 47-52, 2012
11362012
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
9842020
GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information
R Nogales-Cadenas, P Carmona-Saez, M Vazquez, C Vicente, X Yang, ...
Nucleic acids research 37 (suppl_2), W317-W322, 2009
4852009
Pathway and network analysis of cancer genomes
P Creixell, A Gonzalez-Perez, N López Bigas
Nature Methods. 2015 Jul; 12 (7): 615-21, 2015
3182015
Recurrent inactivation of STAG2 in bladder cancer is not associated with aneuploidy
C Balbás-Martínez, A Sagrera, E Carrillo-de-Santa-Pau, J Earl, ...
Nature genetics 45 (12), 1464-1469, 2013
2942013
The CHEMDNER corpus of chemicals and drugs and its annotation principles
M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ...
Journal of cheminformatics 7 (1), 1-17, 2015
2312015
CHEMDNER: The drugs and chemical names extraction challenge
M Krallinger, F Leitner, O Rabal, M Vazquez, J Oyarzabal, A Valencia
Journal of cheminformatics 7 (1), 1-11, 2015
2152015
Computational approaches to identify functional genetic variants in cancer genomes
Nature methods 10 (8), 723-729, 2013
1792013
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ...
BMC bioinformatics 12 (8), 1-31, 2011
1772011
Chimeras taking shape: potential functions of proteins encoded by chimeric RNA transcripts
M Frenkel-Morgenstern, V Lacroix, I Ezkurdia, Y Levin, A Gabashvili, ...
Genome research 22 (7), 1231-1242, 2012
1542012
Text mining for drugs and chemical compounds: methods, tools and applications
M Vazquez, M Krallinger, F Leitner, A Valencia
Molecular Informatics 30 (6‐7), 506-519, 2011
1002011
Quantification of miRNA-mRNA interactions
A Muniategui, R Nogales-Cadenas, M Vázquez, X L. Aranguren, X Agirre, ...
PloS one 7 (2), e30766, 2012
942012
Overview of the chemical compound and drug name recognition (CHEMDNER) task
M Krallinger, F Leitner, O Rabal, M Vazquez, J Oyarzabal, A Valencia
BioCreative challenge evaluation workshop 2, 2, 2013
712013
Pathway and network analysis of more than 2500 whole cancer genomes
MA Reyna, D Haan, M Paczkowska, LPC Verbeke, M Vazquez, ...
Nature communications 11 (1), 1-17, 2020
662020
Overview of the CHEMDNER patents task
M Krallinger, O Rabal, A Lourenço, MP Perez, GP Rodriguez, M Vazquez, ...
Proceedings of the fifth BioCreative challenge evaluation workshop, 63-75, 2015
612015
Neoantigen prediction and computational perspectives towards clinical benefit: recommendations from the ESMO Precision Medicine Working Group
L De Mattos-Arruda, M Vazquez, F Finotello, R Lepore, E Porta, J Hundal, ...
Annals of oncology 31 (8), 978-990, 2020
482020
MyMiner: a web application for computer-assisted biocuration and text annotation
D Salgado, M Krallinger, M Depaule, E Drula, AV Tendulkar, F Leitner, ...
Bioinformatics 28 (17), 2285-2287, 2012
482012
bioNMF: a web-based tool for nonnegative matrix factorization in biology
E Mejía-Roa, P Carmona-Saez, R Nogales, C Vicente, M Vázquez, ...
Nucleic acids research 36 (suppl_2), W523-W528, 2008
442008
Structure-PPi: a module for the annotation of cancer-related single-nucleotide variants at protein–protein interfaces
M Vazquez, A Valencia, T Pons
Bioinformatics 31 (14), 2397-2399, 2015
402015
How to link ontologies and protein–protein interactions to literature: text-mining approaches and the BioCreative experience
M Krallinger, F Leitner, M Vazquez, D Salgado, C Marcelle, M Tyers, ...
Database 2012, 2012
352012
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