| Identification of acquired antimicrobial resistance genes E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ... Journal of antimicrobial chemotherapy 67 (11), 2640-2644, 2012 | 4777 | 2012 |
| Multilocus sequence typing of total-genome-sequenced bacteria MV Larsen, S Cosentino, S Rasmussen, C Friis, H Hasman, RL Marvig, ... Journal of clinical microbiology 50 (4), 1355-1361, 2012 | 2129 | 2012 |
| PathogenFinder-distinguishing friend from foe using bacterial whole genome sequence data S Cosentino, M Voldby Larsen, F Møller Aarestrup, O Lund PloS one 8 (10), e77302, 2013 | 455 | 2013 |
| Benchmarking of methods for genomic taxonomy MV Larsen, S Cosentino, O Lukjancenko, D Saputra, S Rasmussen, ... Journal of clinical microbiology 52 (5), 1529-1539, 2014 | 307 | 2014 |
| SonicParanoid: fast, accurate and easy orthology inference S Cosentino, W Iwasaki Bioinformatics 35 (1), 149-151, 2019 | 101 | 2019 |
| The Quest for Orthologs benchmark service and consensus calls in 2020 AM Altenhoff, J Garrayo-Ventas, S Cosentino, D Emms, NM Glover, ... Nucleic acids research 48 (W1), W538-W545, 2020 | 39 | 2020 |
| The quest for orthologs orthology benchmark service in 2022 Y Nevers, TEM Jones, D Jyothi, B Yates, M Ferret, L Portell-Silva, L Codo, ... Nucleic Acids Research 50 (W1), W623-W632, 2022 | 29 | 2022 |
| Ten Years of Collaborative Progress in the Quest for Orthologs T Linard, Benjamin and Ebersberger, Ingo and McGlynn, Shawn E and Glover ... Molecular Biology and Evolution 38 (8), 3033–3045, 2021 | 27 | 2021 |
| The CGE tool box MV Larsen, KG Joensen, E Zankari, J Ahrenfeldt, O Lukjancenko, ... Applied Genomics of Foodborne Pathogens, 65-90, 2017 | 10 | 2017 |
| SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models S Cosentino, W Iwasaki bioRxiv, 2023.05. 14.540736, 2023 | 2 | 2023 |
| SonicParanoid: extremely fast, accurate, and easy orthology inference S Cosentino, W Iwasaki Bioinformatics. https://doi. org/10.1093/bioinformatics/bty631, 2018 | 1 | 2018 |
| Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years M Anda, S Yamanouchi, S Cosentino, M Sakamoto, M Ohkuma, ... Nature Communications 14 (1), 7232, 2023 | | 2023 |
| The Good, the Bad and the Deadly: Characterisation of bacteria through DNA analysis S Cosentino, MV Larsen, O Lund Technical University of DenmarkDanmarks Tekniske Universitet, Department of …, 2014 | | 2014 |
Ole LundTechnical University of DenmarkVerified email at dtu.dk
