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Wankun Deng
Wankun Deng
UTHealth Houston, Texas, USA
Verified email at uth.tmc.edu
Title
Cited by
Cited by
Year
HemI: a toolkit for illustrating heatmaps
W Deng, Y Wang, Z Liu, H Cheng, Y Xue
PloS one 9 (11), e111988, 2014
9652014
GPS 5.0: an update on the prediction of kinase-specific phosphorylation sites in proteins
C Wang, H Xu, S Lin, W Deng, J Zhou, Y Zhang, Y Shi, D Peng, Y Xue
Genomics, Proteomics and Bioinformatics 18 (1), 72-80, 2020
2432020
PLMD: an updated data resource of protein lysine modifications
H Xu, J Zhou, S Lin, W Deng, Y Zhang, Y Xue
Journal of Genetics and Genomics 44 (5), 243-250, 2017
1962017
PTMD: a database of human disease-associated post-translational modifications
H Xu, Y Wang, S Lin, W Deng, D Peng, Q Cui, Y Xue
Genomics, Proteomics and Bioinformatics 16 (4), 244-251, 2018
1712018
GPS-PAIL: prediction of lysine acetyltransferase-specific modification sites from protein sequences
W Deng, C Wang, Y Zhang, Y Xu, S Zhang, Z Liu, Y Xue
Scientific reports 6 (1), 39787, 2016
1052016
WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes
Y Xu, S Zhang, S Lin, Y Guo, W Deng, Y Zhang, Y Xue
Nucleic acids research, gkw1011, 2016
972016
Database resources of the BIG data center in 2019
BIGDC Members
Nucleic acids research 47 (Database issue), D8, 2019
932019
Computational prediction of methylation types of covalently modified lysine and arginine residues in proteins
W Deng, Y Wang, L Ma, Y Zhang, S Ullah, Y Xue
Briefings in Bioinformatics 18 (4), 647-658, 2017
862017
dbPAF: an integrative database of protein phosphorylation in animals and fungi
S Ullah, S Lin, Y Xu, W Deng, L Ma, Y Zhang, Z Liu, Y Xue
Scientific reports 6 (1), 23534, 2016
792016
CGDB: a database of circadian genes in eukaryotes
S Li, K Shui, Y Zhang, Y Lv, W Deng, S Ullah, L Zhang, Y Xue
Nucleic Acids Research, gkw1028, 2016
672016
Mechanism of cargo recognition by retromer-linked SNX-BAR proteins
X Yong, L Zhao, W Deng, H Sun, X Zhou, L Mao, W Hu, X Shen, Q Sun, ...
PLoS biology 18 (3), e3000631, 2020
662020
iUUCD 2.0: an update with rich annotations for ubiquitin and ubiquitin-like conjugations
J Zhou, Y Xu, S Lin, Y Guo, W Deng, Y Zhang, A Guo, Y Xue
Nucleic acids research 46 (D1), D447-D453, 2018
652018
Phosphoproteome-based kinase activity profiling reveals the critical role of MAP2K2 and PLK1 in neuronal autophagy
LL Chen, YB Wang, JX Song, WK Deng, JH Lu, LL Ma, CB Yang, M Li, ...
Autophagy 13 (11), 1969-1980, 2017
562017
dbPPT: a comprehensive database of protein phosphorylation in plants
H Cheng, W Deng, Y Wang, J Ren, Z Liu, Y Xue
Database 2014, 2014
552014
Information commons for rice (IC4R)
IC4R Project Consortium
Nucleic acids research 44 (D1), D1172-D1180, 2016
452016
An integrative multi-omics approach uncovers the regulatory role of CDK7 and CDK4 in autophagy activation induced by silica nanoparticles
C Ruan, C Wang, X Gong, Y Zhang, W Deng, J Zhou, D Huang, Z Wang, ...
Autophagy 17 (6), 1426-1447, 2021
412021
THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy
W Deng, L Ma, Y Zhang, J Zhou, Y Wang, Z Liu, Y Xue
Autophagy 14 (2), 296-310, 2018
392018
Phosphorylation of SNX27 by MAPK11/14 links cellular stress–signaling pathways with endocytic recycling
L Mao, C Liao, J Qin, Y Gong, Y Zhou, S Li, Z Liu, H Deng, W Deng, Q Sun, ...
Journal of Cell Biology 220 (4), 2021
302021
HybridSucc: a hybrid-learning architecture for general and species-specific succinylation site prediction
W Ning, H Xu, P Jiang, H Cheng, W Deng, Y Guo, Y Xue
Genomics, Proteomics and Bioinformatics 18 (2), 194-207, 2020
302020
Towards a better understanding of the novel avian-origin H7N9 influenza A virus in China
Y Wang, Z Dai, H Cheng, Z Liu, Z Pan, W Deng, T Gao, X Li, Y Yao, J Ren, ...
Scientific Reports 3 (1), 2318, 2013
302013
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