Martijn Huynen

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Berend SnelUtrecht UniversityVerified email at uu.nl
Peer BorkDirector of EMBL HeidelbergVerified email at embl.de
Bas E. DutilhMicroverse Cluster, Friedrich Schiller University Jena | Theoretical Biology and BioinformaticsVerified email at uni-jena.de
Thomas DandekarProfessor, Julius Maximilian University of Würzburg, GermanyVerified email at uni-wuerzburg.de
Prof. dr. Jan A.M. SmeitinkProfessor in Mitochondrial MedicineVerified email at radboudumc.nl
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB) and Barcelona Supercomputing Centre (BSC)Verified email at crg.es
Richard RodenburgClinical Laboratory GeneticistVerified email at radboudumc.nl
Vera van Noortprofessor, KULeuvenVerified email at biw.kuleuven.be
Willem JG MelchersVerified email at radboudumc.nl
Peter F StadlerProfessor of Bioinformatics, Univ. LeipzigVerified email at bioinf.uni-leipzig.de
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsVerified email at imls.uzh.ch
Robin van der LeeAbCellera BiologicsVerified email at cmmt.ubc.ca
Isabel DuarteUniversity of AlgarveVerified email at ualg.pt
Thijs J. G. EttemaLaboratory of Microbiology, Wageningen University, The NetherlandsVerified email at wur.nl
a.g.m.tielensUtrecht University, Fac. Vet. Medicine and Erasmus MC, University Medical Center RotterdamVerified email at uu.nl
Joris VeltmanBiosciences Institute, Newcastle University, United KingdomVerified email at newcastle.ac.uk
Neil McEwanRobert Gordon UniversityVerified email at rgu.ac.uk
John van der OostMicrobiology, Wageningen UniversityVerified email at wur.nl
Yan P. YuanEuropean Molecular Biology Laboratory (EMBL)Verified email at embl.de
Philip Reiner KenscheVerified email at dkfz-heidelberg.de

Martijn Huynen

CMBI, Radboud University Medical Centre

Verified email at radboudumc.nl

bioinformatics cilia mitochondria molecular evolution


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STRING: a database of predicted functional associations between proteins C Mering, M Huynen, D Jaeggi, S Schmidt, P Bork, B Snel Nucleic acids research 31 (1), 258-261, 2003	1947	2003
STRING: known and predicted protein–protein associations, integrated and transferred across organisms C Von Mering, LJ Jensen, B Snel, SD Hooper, M Krupp, M Foglierini, ... Nucleic acids research 33 (suppl_1), D433-D437, 2005	1658	2005
Conservation of gene order: a fingerprint of proteins that physically interact T Dandekar, B Snel, M Huynen, P Bork Trends in biochemical sciences 23 (9), 324-328, 1998	1339	1998
Deciphering the evolution and metabolism of an anammox bacterium from a community genome M Strous, E Pelletier, S Mangenot, T Rattei, A Lehner, MW Taylor, M Horn, ... Nature 440 (7085), 790-794, 2006	1216	2006
STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene B Snel, G Lehmann, P Bork, MA Huynen Nucleic acids research 28 (18), 3442-3444, 2000	1092	2000
Genome phylogeny based on gene content B Snel, P Bork, MA Huynen Nature genetics 21 (1), 108-110, 1999	802	1999
Smoothness within ruggedness: the role of neutrality in adaptation. MA Huynen, PF Stadler, W Fontana Proceedings of the National Academy of Sciences 93 (1), 397-401, 1996	714	1996
Neutral evolution of mutational robustness E Van Nimwegen, JP Crutchfield, M Huynen Proceedings of the National Academy of Sciences 96 (17), 9716-9720, 1999	679	1999
Predicting disease genes using protein–protein interactions M Oti, B Snel, MA Huynen, HG Brunner Journal of medical genetics 43 (8), 691-698, 2006	619	2006
Predicting protein function by genomic context: quantitative evaluation and qualitative inferences M Huynen, B Snel, W Lathe, P Bork Genome research 10 (8), 1204-1210, 2000	602	2000
Measuring genome evolution MA Huynen, P Bork Proceedings of the National Academy of Sciences 95 (11), 5849-5856, 1998	577	1998
Predicting function: from genes to genomes and back P Bork, T Dandekar, Y Diaz-Lazcoz, F Eisenhaber, M Huynen, Y Yuan Journal of molecular biology 283 (4), 707-725, 1998	547	1998
POMT2 mutations cause α-dystroglycan hypoglycosylation and Walker-Warburg syndrome J van Reeuwijk, M Janssen, C van den Elzen, DBV De Bernabé, ... Journal of medical genetics 42 (12), 907-912, 2005	442	2005
Genomes in flux: the evolution of archaeal and proteobacterial gene content B Snel, P Bork, MA Huynen Genome research 12 (1), 17-25, 2002	435	2002
Pathway alignment: application to the comparative analysis of glycolytic enzymes T Dandekar, S Schuster, B Snel, M Huynen, P Bork Biochemical Journal 343 (1), 115-124, 1999	354	1999
Whole-genome sequencing of bacterial pathogens: the future of nosocomial outbreak analysis S Quainoo, JPM Coolen, SAFT van Hijum, MA Huynen, WJG Melchers, ... Clinical microbiology reviews 30 (4), 1015-1063, 2017	338	2017
The identification of functional modules from the genomic association of genes B Snel, P Bork, MA Huynen Proceedings of the National Academy of Sciences 99 (9), 5890-5895, 2002	315	2002
Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames T Dandekar, M Huynen, JT Regula, B Ueberle, CU Zimmermann, ... Nucleic acids research 28 (17), 3278-3288, 2000	314	2000
The yeast coexpression network has a small‐world, scale‐free architecture and can be explained by a simple model V Van Noort, B Snel, MA Huynen EMBO reports 5 (3), 280-284, 2004	298	2004
An anaerobic mitochondrion that produces hydrogen B Boxma, RM de Graaf, GWM van der Staay, TA van Alen, G Ricard, ... Nature 434 (7029), 74-79, 2005	281	2005

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