Alfonso Valencia

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Martin Krallinger*Head of Text Mining Unit, Barcelona Supercomputing Center (BSC-CNS)Verified email at bsc.es
David JuanInstitut de Biologia Evolutiva (UPF-CSIC)Verified email at upf.edu
Chris SanderHarvard Medical School, Broad Institute, Dana-Farber Cancer Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Florian LeitnerData Catalytics, ION Analytics, IE UniversityVerified email at datacatalytics.com
Christos Α. OuzounisAUTH, Thessalonica, Greece • CERTH, Thessalonica, GreeceVerified email at csd.auth.gr
Luis Sanchez-PulidoSenior Investigator Scientist IGC HG-MRC University of EdinburghVerified email at ed.ac.uk
Iakes EzkurdiaSpanish National Cardiovascular Research Center CNICVerified email at cnic.es
Ana M Rojas-Mendoza (0000-0003-07...CSIC Research Scientist, Group Leader, Bioinformatics and Computational Biology, Centro Andaluz deVerified email at upo.es
Miguel AndradeJohannes-Gutenberg University in MainzVerified email at uni-mainz.de
Miguel VazquezBarcelona Supercomputing Center - Spanish National HPCVerified email at bsc.es
ENRIQUE CARRILLO DE SANTA PAU...IMDEA Food Institute (ROR 04g4ezh90). Madrid. SPAINVerified email at imdea.org
Daniel RicoBiosciences InstituteVerified email at newcastle.ac.uk
Vera PancaldiCancer Research Centre of ToulouseVerified email at inserm.fr
Tirso PonsCNB-CSIC, MadridVerified email at cnb.csic.es
Peer BorkDirector of EMBL HeidelbergVerified email at embl.de
Tabares-Seisdedos, Rafael (ORCID: 0...University of Valencia (ROR: 043nxc105) - CIBERSAM (ROR: 009byq155) - INCLIVA (ROR: 059wbyv33)Verified email at uv.es
Burkhard RostProfessor of Computer Science & Computational Biology & Bioinformatics, TUM, MunichVerified email at tum.de
Anaïs BaudotCNRS - Inserm - AMUVerified email at univ-amu.fr
Federico AbascalCancer, Aging and Somatic Mutation, Wellcome Sanger InstituteVerified email at sanger.ac.uk
Joaquin DopazoComputational Medicine Platform, FPS, Hospital Virgen del Rocio, Sevilla, SpainVerified email at juntadeandalucia.es

Alfonso Valencia

ICREA Professor. Barcelona Supercomputing Center.

Verified email at bsc.es - Homepage

computational biology bioinformatics cancer genomics text mining protein evolution.


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012	12460	2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007	5764	2007
GENCODE: the reference human genome annotation for The ENCODE Project J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ... Genome research 22 (9), 1760-1774, 2012	4722	2012
International network of cancer genome projects Data coordination centre Kasprzyk (Leader) Arek 1 Stein (Leader) Lincoln D ... Nature 464 (7291), 993-998, 2010	2099	2010
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia XS Puente, M Pinyol, V Quesada, L Conde, GR Ordóñez, N Villamor, ... Nature 475 (7354), 101-105, 2011	1747	2011
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011	1380	2011
Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020	1178*	2020
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ... Nature genetics 44 (1), 47-52, 2012	1143	2012
IntAct: an open source molecular interaction database H Hermjakob, L Montecchi‐Palazzi, C Lewington, S Mudali, S Kerrien, ... Nucleic acids research 32 (suppl_1), D452-D455, 2004	1106	2004
An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and hsp70 heat shock proteins. P Bork, C Sander, A Valencia Proceedings of the National Academy of Sciences 89 (16), 7290-7294, 1992	1054	1992
Correlated mutations and residue contacts in proteins U Göbel, C Sander, R Schneider, A Valencia Proteins: Structure, Function, and Bioinformatics 18 (4), 309-317, 1994	1029	1994
The allelic landscape of human blood cell trait variation and links to common complex disease WJ Astle, H Elding, T Jiang, D Allen, D Ruklisa, AL Mann, D Mead, ... Cell 167 (5), 1415-1429. e19, 2016	950	2016
Non-coding recurrent mutations in chronic lymphocytic leukaemia XS Puente, S Beà, R Valdés-Mas, N Villamor, J Gutiérrez-Abril, ... Nature 526 (7574), 519-524, 2015	879	2015
A hierarchical unsupervised growing neural network for clustering gene expression patterns J Herrero, A Valencia, J Dopazo Bioinformatics 17 (2), 126-136, 2001	789	2001
Distinct DNA methylomes of newborns and centenarians H Heyn, N Li, HJ Ferreira, S Moran, DG Pisano, A Gomez, J Diez, ... Proceedings of the National Academy of Sciences 109 (26), 10522-10527, 2012	780	2012
The ras protein family: evolutionary tree and role of conserved amino acids A Valencia, P Chardin, A Wittinghofer, C Sander Biochemistry 30 (19), 4637-4648, 1991	752	1991
Expanded encyclopaedias of DNA elements in the human and mouse genomes Nature 583, 699–710, 2020	729	2020
Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes I Ezkurdia, D Juan, JM Rodriguez, A Frankish, M Diekhans, J Harrow, ... Human molecular genetics 23 (22), 5866-5878, 2014	706	2014
Correlated mutations contain information about protein-protein interaction F Pazos, M Helmer-Citterich, G Ausiello, A Valencia Journal of molecular biology 271 (4), 511-523, 1997	672	1997
Automatic extraction of biological information from scientific text: protein-protein interactions. C Blaschke, MA Andrade, CA Ouzounis, A Valencia Ismb 7, 60-67, 1999	650	1999

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