| Cross-species single-cell analysis of pancreatic ductal adenocarcinoma reveals antigen-presenting cancer-associated fibroblasts E Elyada, M Bolisetty, P Laise, WF Flynn, ET Courtois, RA Burkhart, ... Cancer discovery 9 (8), 1102-1123, 2019 | 1308 | 2019 |
| Single-cell genomics reveals a novel cell state during smooth muscle cell phenotypic switching and potential therapeutic targets for atherosclerosis in mouse and human H Pan, C Xue, BJ Auerbach, J Fan, AC Bashore, J Cui, DY Yang, ... Circulation 142 (21), 2060-2075, 2020 | 351 | 2020 |
| Experimental microdissection enables functional harmonisation of pancreatic cancer subtypes C Maurer, SR Holmstrom, J He, P Laise, T Su, A Ahmed, H Hibshoosh, ... Gut 68 (6), 1034-1043, 2019 | 168 | 2019 |
| Cell reprogramming requires silencing of a core subset of polycomb targets G Fragola, PL Germain, P Laise, A Cuomo, A Blasimme, F Gross, ... PLoS genetics 9 (2), e1003292, 2013 | 77 | 2013 |
| RNAontheBENCH: computational and empirical resources for benchmarking RNAseq quantification and differential expression methods PL Germain, A Vitriolo, A Adamo, P Laise, V Das, G Testa Nucleic acids research 44 (11), 5054-5067, 2016 | 56 | 2016 |
| The ion channels and transporters gene expression profile indicates a shift in excitability and metabolisms during malignant progression of Follicular Lymphoma A Magi, M Masselli, C Sala, A Guerriero, P Laise, B Puccini, L Rigacci, ... Scientific Reports 9 (1), 8586, 2019 | 26 | 2019 |
| Polycomb dysregulation in gliomagenesis targets a Zfp423-dependent differentiation network E Signaroldi, P Laise, S Cristofanon, A Brancaccio, E Reisoli, S Atashpaz, ... Nature communications 7 (1), 10753, 2016 | 22 | 2016 |
| A cell-of-origin epigenetic tracer reveals clinically distinct subtypes of high-grade serous ovarian cancer P Lo Riso, CE Villa, G Gasparoni, A Vingiani, R Luongo, A Manfredi, ... Genome Medicine 12, 1-20, 2020 | 16 | 2020 |
| The host cell virocheckpoint: identification and pharmacologic targeting of novel mechanistic determinants of coronavirus-mediated hijacked cell states P Laise, G Bosker, X Sun, Y Shen, EF Douglass, C Karan, RB Realubit, ... BioRxiv, 2020 | 15 | 2020 |
| Pancreatic ductal adenocarcinoma comprises coexisting regulatory states with both common and distinct dependencies P Laise, M Turunen, HC Maurer, AG Curiel, E Elyada, B Schmierer, ... Biorxiv, preprint, 2020 | 15 | 2020 |
| Deterministic and stochastic aspects of VEGF-A production and the cooperative behavior of tumoral cell colony P Laise, F Di Patti, D Fanelli, M Masselli, A Arcangeli Journal of theoretical biology 272 (1), 55-63, 2011 | 11 | 2011 |
| PISCES: A pipeline for the systematic, protein activity-based analysis of single cell RNA sequencing data A Obradovic, L Vlahos, P Laise, J Worley, X Tan, A Wang, A Califano Biorxiv 6, 22, 2021 | 10 | 2021 |
| Deregulation of ion channel and transporter encoding genes in pediatric gliomas M Masselli, P Laise, G Tonini, D Fanelli, S Pillozzi, V Cetica, M Da Ros, ... Frontiers in Oncology 2, 53, 2012 | 10 | 2012 |
| EZH2-mediated H3K27me3 targets transcriptional circuits of neuronal differentiation S Buontempo, P Laise, JM Hughes, S Trattaro, V Das, C Rencurel, ... Frontiers in Neuroscience 16, 814144, 2022 | 9 | 2022 |
| Single-cell based elucidation of molecularly-distinct glioblastoma states and drug sensitivity H Ding, DM Burgenske, W Zhao, PS Subramaniam, KK Bakken, L He, ... bioRxiv, 675439, 2019 | 6 | 2019 |
| A dynamical model of apoptosis and its role in tumor progression P Laise, D Fanelli, A Arcangeli Communications in Nonlinear Science and Numerical Simulation 17 (4), 1795-1804, 2012 | 6 | 2012 |
| Modeling TGF-β signaling pathway in epithelial-mesenchymal transition P Laise, D Fanelli, P Lió, A Arcangeli AIP Advances 2 (1), 2012 | 6 | 2012 |
| A model for network-based identification and pharmacological targeting of aberrant, replication-permissive transcriptional programs induced by viral infection P Laise, ML Stanifer, G Bosker, X Sun, S Triana, P Doldan, F La Manna, ... Communications biology 5 (1), 714, 2022 | 3 | 2022 |
| Systematic, protein activity-based characterization of single cell State L Vlahos, A Obradovic, J Worley, X Tan, A Howe, P Laise, A Wang, ... bioRxiv, 2021.05. 20.445002, 2021 | 3 | 2021 |
| Tff2 defines transit-amplifying pancreatic acinar progenitors that lack regenerative potential and are protective against Kras-driven carcinogenesis Z Jiang, F Wu, P Laise, T Takayuki, F Na, W Kim, H Kobayashi, W Chang, ... Cell Stem Cell 30 (8), 1091-1109. e7, 2023 | 2 | 2023 |
Andrea CalifanoColumbia Verified email at c2b2.columbia.edu
