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Mhaned Oubounyt
Mhaned Oubounyt
Institute for Computational Systems Biology, University of Hamburg
Verified email at uni-hamburg.de - Homepage
Title
Cited by
Cited by
Year
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing
S Sadegh, J Matschinske, DB Blumenthal, G Galindez, T Kacprowski, ...
Nature communications 11 (1), 3518, 2020
1622020
DeePromoter: robust promoter predictor using deep learning
M Oubounyt, Z Louadi, H Tayara, KT Chong
Frontiers in genetics 10, 453150, 2019
1392019
Deep learning models based on distributed feature representations for alternative splicing prediction
M Oubounyt, Z Louadi, H Tayara, KT Chong
IEEE Access 6, 58826-58834, 2018
382018
Deep splicing code: Classifying alternative splicing events using deep learning
Z Louadi, M Oubounyt, H Tayara, KT Chong
Genes 10 (8), 587, 2019
362019
DeePromoter: robust pro‑moter predictor using deep learning. Front Genet. 2019; 10: 286
M Oubounyt, Z Louadi, H Tayara, KT Chong
62019
Laminarin-triggered defence responses are geographically dependent in natural populations of Solanum chilense
PS Kahlon, A Förner, M Muser, M Oubounyt, M Gigl, R Hammerl, ...
Journal of Experimental Botany 74 (10), 3240-3254, 2023
52023
Enabling single-cell trajectory network enrichment
AGB Grønning, M Oubounyt, K Kanev, J Lund, T Kacprowski, D Zehn, ...
Nature Computational Science 1 (2), 153-163, 2021
52021
Drugst. One-A plug-and-play solution for online systems medicine and network-based drug repurposing
A Maier, M Hartung, M Abovsky, K Adamowicz, GD Bader, S Baier, ...
Arxiv, 2023
42023
Intraspecific diversity observed in the wild tomato species Solanum chilense in initial immune responses towards a glucan elicitor
PS Kahlon, A Förner, M Muser, M Oubounyt, M Gigl, R Hammerl, ...
bioRxiv, 2021.06. 25.449942, 2021
32021
Identification of promoters and their strength using deep learning
H Tayara, M Oubounyt, KT Chong
IBRO Reports 6, S552-S553, 2019
32019
Network analyses reveal D clade ethylene response factors as major regulators of jasmonic acid-mediated resistance to early blight disease complex in tomato
C Tominello-Ramirez, L Muòoz Hoyos, M Oubounyt, R Stam
bioRxiv, 2023.10. 14.562343, 2023
12023
Inference of differential key regulatory networks and mechanistic drug repurposing candidates from scRNA-seq data with SCANet
M Oubounyt, L Adlung, F Patroni, NK Wenke, A Maier, M Hartung, ...
Bioinformatics 39 (11), btad644, 2023
2023
A single-cell multi-omics map of cell-type-specific mechanistic drivers of multiple sclerosis lesions
ML Elkjaer, A Hartebrodt, M Oubounyt, A Weber, L Vitved, R Reynolds, ...
Available at SSRN 4517679, 2023
2023
De-novo reconstruction and identification of transcriptional gene regulatory network modules differentiating single-cell clusters
M Oubounyt, ML Elkjaer, T Laske, AGB Grønning, MJ Moeller, ...
NAR Genomics and Bioinformatics 5 (1), lqad018, 2023
2023
Differential network-based methods for the integration of omics data: overview and challenges
FM Delgado-Chaves, M Oubounyt, FA Gómez-Vela, F Divina, ...
RExPO22, 2022
2022
Targeting infectious diseases: The CoVex example
S Sadegh, J Matschinske, DB Blumenthal, G Galindez, T Kacprowski, ...
RExPO22, 2022
2022
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing (preprint)
S Sadegh, J Matschinske, DB Blumenthal, G Galindez, T Kacprowski, ...
2020
Drugst. One-A plug-and-play solution for online systems medicine and network-based drug repurposing
QM Malod-Dognin15, J Matschinske, M Oubounyt, R Alexander, ...
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