In-silico evidence for a two receptor based strategy of SARS-CoV-2 E Milanetti, M Miotto, L Di Rienzo, M Nagaraj, M Monti, TW Golbek, ... Frontiers in molecular biosciences 8, 690655, 2021 | 112 | 2021 |
Insights on protein thermal stability: a graph representation of molecular interactions M Miotto, PP Olimpieri, L Di Rienzo, F Ambrosetti, P Corsi, R Lepore, ... Bioinformatics 35 (15), 2569-2577, 2019 | 60 | 2019 |
Molecular mechanisms behind anti SARS-CoV-2 action of lactoferrin M Miotto, L Di Rienzo, L Bò, A Boffi, G Ruocco, E Milanetti Frontiers in molecular biosciences 8, 607443, 2021 | 40 | 2021 |
Does blood type affect the COVID-19 infection pattern? M Miotto, L Di Rienzo, G Gosti, E Milanetti, G Ruocco Plos one 16 (5), e0251535, 2021 | 30 | 2021 |
Superposition-free comparison and clustering of antibody binding sites: implications for the prediction of the nature of their antigen L Di Rienzo, E Milanetti, R Lepore, PP Olimpieri, A Tramontano Scientific reports 7 (1), 45053, 2017 | 27 | 2017 |
2D Zernike polynomial expansion: Finding the protein-protein binding regions E Milanetti, M Miotto, L Di Rienzo, M Monti, G Gosti, G Ruocco Computational and structural biotechnology journal 19, 29-36, 2021 | 21 | 2021 |
Exploring the association between sialic acid and SARS-CoV-2 spike protein through a molecular dynamics-based approach L Bò, M Miotto, L Di Rienzo, E Milanetti, G Ruocco Frontiers in Medical Technology 2, 614652, 2021 | 19 | 2021 |
Characterizing hydropathy of amino acid side chain in a protein environment by investigating the structural changes of water molecules network L Di Rienzo, M Miotto, L Bò, G Ruocco, D Raimondo, E Milanetti Frontiers in Molecular Biosciences 8, 626837, 2021 | 18 | 2021 |
Quantitative characterization of binding pockets and binding complementarity by means of zernike descriptors L Di Rienzo, E Milanetti, J Alba, M D’Abramo Journal of Chemical Information and Modeling 60 (3), 1390-1398, 2020 | 18 | 2020 |
Molecular dynamics simulations reveal canonical conformations in different pMHC/TCR interactions J Alba, L Di Rienzo, E Milanetti, O Acuto, M D’Abramo Cells 9 (4), 942, 2020 | 16 | 2020 |
Inferring the stabilization effects of SARS-CoV-2 variants on the binding with ACE2 receptor M Miotto, L Di Rienzo, G Gosti, L Bo’, G Parisi, R Piacentini, A Boffi, ... Communications biology 5 (1), 20221, 2022 | 15 | 2022 |
Exploiting reaction‐diffusion conditions to trigger pathway complexity in the growth of a MOF NC Galve, A Abrishamkar, A Sorrenti, L Di Rienzo, M Satta, M D'Abramo, ... Angewandte Chemie International Edition, 2021 | 13* | 2021 |
Spatial organization of hydrophobic and charged residues affects protein thermal stability and binding affinity F Desantis, M Miotto, L Di Rienzo, E Milanetti, G Ruocco Scientific Reports 12 (1), 1-13, 2022 | 11* | 2022 |
Simulated epidemics in 3d protein structures to detect functional properties M Miotto, L Di Rienzo, P Corsi, G Ruocco, D Raimondo, E Milanetti Journal of Chemical Information and Modeling 60 (3), 1884-1891, 2020 | 11 | 2020 |
Computational optimization of angiotensin-converting enzyme 2 for SARS-CoV-2 Spike molecular recognition L Di Rienzo, M Monti, E Milanetti, M Miotto, A Boffi, GG Tartaglia, ... Computational and Structural Biotechnology Journal 19, 3006-3014, 2021 | 8 | 2021 |
Insights into the Interaction Mechanism of DTP3 with MKK7 by Using STD-NMR and Computational Approaches A Sandomenico, L Di Rienzo, L Calvanese, E Iaccarino, G D’Auria, ... Biomedicines 9 (1), 20, 2020 | 8 | 2020 |
Binding site identification of G protein-coupled receptors through a 3D Zernike polynomials-based method: application to C. elegans olfactory receptors L Di Rienzo, L De Flaviis, G Ruocco, V Folli, E Milanetti Journal of Computer-Aided Molecular Design, 1-14, 2022 | 6 | 2022 |
A novel strategy for molecular interfaces optimization: the case of ferritin-transferrin receptor interaction L Di Rienzo, E Milanetti, C Testi, LC Montemiglio, P Baiocco, A Boffi, ... Computational and structural biotechnology journal 18, 2678-2686, 2020 | 6 | 2020 |
Thermometer: a webserver to predict protein thermal stability M Miotto, A Armaos, L Di Rienzo, G Ruocco, E Milanetti, GG Tartaglia Bioinformatics 38 (7), 2060, 2022 | 5 | 2022 |
Shape Complementarity Optimization of Antibody–Antigen Interfaces: The Application to SARS-CoV-2 Spike Protein A De Lauro, L Di Rienzo, M Miotto, PP Olimpieri, E Milanetti, G Ruocco Frontiers in Molecular Biosciences 9, 2022 | 5 | 2022 |