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Fabio Vandin
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Integrated genomic analyses of ovarian carcinoma
Cancer Genome Atlas Research Network
Nature 474 (7353), 609, 2011
68982011
The cancer genome atlas pan-cancer analysis project
JN Weinstein, EA Collisson, GB Mills, KR Shaw, BA Ozenberger, K Ellrott, ...
Nature genetics 45 (10), 1113-1120, 2013
65652013
Mutational landscape and significance across 12 major cancer types
C Kandoth, MD McLellan, F Vandin, K Ye, B Niu, C Lu, M Xie, Q Zhang, ...
Nature 502 (7471), 333-339, 2013
47432013
Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia
Cancer Genome Atlas Research Network
New England Journal of Medicine 368 (22), 2059-2074, 2013
46802013
Comprehensive molecular characterization of clear cell renal cell carcinoma
Cancer Genome Atlas Research Network Analysis working group: Baylor College ...
Nature 499 (7456), 43-49, 2013
28322013
The mutational landscape of lethal castration-resistant prostate cancer
CS Grasso, YM Wu, DR Robinson, X Cao, SM Dhanasekaran, AP Khan, ...
Nature 487 (7406), 239-243, 2012
27142012
Integrated genomic characterization of papillary thyroid carcinoma
N Agrawal, R Akbani, BA Aksoy, A Ally, H Arachchi, SL Asa, JT Auman, ...
Cell 159 (3), 676-690, 2014
25362014
Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin
KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, ...
Cell 158 (4), 929-944, 2014
15462014
Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes
MDM Leiserson, F Vandin, HT Wu, JR Dobson, JV Eldridge, JL Thomas, ...
Nature genetics 47 (2), 106-114, 2015
9262015
De novo Discovery of Mutated Driver Pathways in Cancer.
F Vandin, E Upfal, BJ Raphael.
In Proceedings 15th International Conference on Research in Computational …, 2011
4692011
Algorithms for detecting significantly mutated pathways in cancer
F Vandin, E Upfal, BJ Raphael
Journal of Computational Biology 18 (3), 507-522, 2011
4562011
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
3322018
Identifying driver mutations in sequenced cancer genomes: computational approaches to enable precision medicine
BJ Raphael, JR Dobson, L Oesper, F Vandin
Genome medicine 6, 1-17, 2014
2542014
CoMEt: A Statistical Approach to Identify Combinations of Mutually Exclusive Alterations in Cancer.
MDM Leiserson, HT Wu, F Vandin, BJ Raphael.
In Proceedings 19th Annual International Conference on Research in …, 2015
2372015
Discovery of mutated subnetworks associated with clinical data in cancer
F Vandin, P Clay, E Upfal, BJ Raphael
Biocomputing 2012, 55-66, 2012
1282012
De novo pathway-based biomarker identification
N Alcaraz, M List, R Batra, F Vandin, HJ Ditzel, J Baumbach
Nucleic acids research 45 (16), e151-e151, 2017
572017
An Efficient Rigorous Approach for Identifying Statistically Significant Frequent Itemsets
A Kirsch, M Mitzenmacher, A Pietracaprina, G Pucci, E Upfal, F Vandin
28th ACM Symposium on Principles of Database Systems (PODS), 2009
562009
Clustering uncertain graphs
M Ceccarello, C Fantozzi, A Pietracaprina, G Pucci, F Vandin
Proceedings of the VLDB Endowment 11 (4), 472-484, 2017
552017
Algorithms on evolving graphs
A Anagnostopoulos, R Kumar, M Mahdian, E Upfal, F Vandin
Proceedings of the 3rd Innovations in Theoretical Computer Science …, 2012
542012
Efficient Mining of the Most Significant Patterns with Permutation Testing.
L Pellegrina, F Vandin
24th ACM SIGKDD International Conference on Knowledge Discovery and Data …, 2018
512018
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