Ernest Lee
Ernest Lee
Visiting Scientist, Sackler Institute for Comparative Genomics, American Museum of Natural History
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Oil palm genome sequence reveals divergence of interfertile species in Old and New worlds
R Singh, M Ong-Abdullah, ETL Low, MAA Manaf, R Rosli, R Nookiah, ...
Nature 500 (7462), 335-339, 2013
Phylogenomics resolves evolutionary relationships among ants, bees, and wasps
BR Johnson, ML Borowiec, JC Chiu, EK Lee, J Atallah, PS Ward
Current Biology 23 (20), 2058-2062, 2013
A functional phylogenomic view of the seed plants
EK Lee, A Cibrian-Jaramillo, SO Kolokotronis, MS Katari, A Stamatakis, ...
PLoS genetics 7 (12), e1002411, 2011
Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa
ML Borowiec, EK Lee, JC Chiu, DC Plachetzki
BMC genomics 16 (1), 1-15, 2015
Genome of Drosophila suzukii, the Spotted Wing Drosophila
JC Chiu, X Jiang, L Zhao, CA Hamm, JM Cridland, P Saelao, KA Hamby, ...
G3: Genes, Genomes, Genetics 3 (12), 2257-2271, 2013
OrthologID: automation of genome-scale ortholog identification within a parsimony framework
JC Chiu, EK Lee, MG Egan, IN Sarkar, GM Coruzzi, R DeSalle
Bioinformatics 22 (6), 699-707, 2006
The impact of outgroup choice and missing data on major seed plant phylogenetics using genome-wide EST data
JE De La Torre-bárcena, SO Kolokotronis, EK Lee, DW Stevenson, ...
PLoS One 4 (6), e5764, 2009
Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics
IN Sarkar, MG Egan, G Coruzzi, EK Lee, R DeSalle
BMC bioinformatics 9, 1-5, 2008
Using phylogenomic patterns and gene ontology to identify proteins of importance in plant evolution
A Cibrian-Jaramillo, JE De la Torre-Barcena, EK Lee, MS Katari, DP Little, ...
Genome Biology and Evolution 2, 225-239, 2010
A whole-genome phylogeny of the family Pasteurellaceae
MP Di Bonaventura, EK Lee, R DeSalle, PJ Planet
Molecular phylogenetics and evolution 54 (3), 950-956, 2010
Sequencing of Tuta absoluta genome to develop SNP genotyping assays for species identification
CA Tabuloc, KM Lewald, WR Conner, Y Lee, EK Lee, AB Cain, ...
Journal of Pest Science 92, 1397-1407, 2019
Using whole genome presence/absence data to untangle function in 12 Drosophila genomes
JA Rosenfeld, EK Lee, PM O'Grady, R DeSalle
Fly 2 (6), 291-299, 2008
OrthoReD: a rapid and accurate orthology prediction tool with low computational requirement
K Battenberg, EK Lee, JC Chiu, AM Berry, D Potter
BMC bioinformatics 18 (1), 1-12, 2017
Gene Orthology Assessment with OrthologID
M Egan, EK Lee, JC Chiu, G Coruzzi, R DeSalle
Bioinformatics for DNA Sequence Analysis, 23-38, 2009
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