| Structural changes of gut microbiota during berberine-mediated prevention of obesity and insulin resistance in high-fat diet-fed rats X Zhang, Y Zhao, M Zhang, X Pang, J Xu, C Kang, M Li, C Zhang, ... Public Library of Science 7 (8), e42529, 2012 | 735 | 2012 |
| Modulation of gut microbiota by berberine and metformin during the treatment of high-fat diet-induced obesity in rats X Zhang, Y Zhao, J Xu, Z Xue, M Zhang, X Pang, X Zhang, L Zhao Scientific reports 5 (1), 14405, 2015 | 618 | 2015 |
| Structural modulation of gut microbiota during alleviation of type 2 diabetes with a Chinese herbal formula J Xu, F Lian, L Zhao, Y Zhao, X Chen, X Zhang, Y Guo, C Zhang, Q Zhou, ... The ISME journal 9 (3), 552-562, 2015 | 456 | 2015 |
| Quantitative analysis of SARS-CoV-2 RNA from wastewater solids in communities with low COVID-19 incidence and prevalence PM D'Aoust, E Mercier, D Montpetit, JJ Jia, I Alexandrov, N Neault, ... Water research 188, 116560, 2021 | 331 | 2021 |
| Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease X Zhang, SA Deeke, Z Ning, AE Starr, J Butcher, J Li, J Mayne, K Cheng, ... Nature communications 9 (1), 2873, 2018 | 223 | 2018 |
| Advancing functional and translational microbiome research using meta-omics approaches X Zhang, L Li, J Butcher, A Stintzi, D Figeys Microbiome 7, 1-12, 2019 | 220 | 2019 |
| Catching a resurgence: Increase in SARS-CoV-2 viral RNA identified in wastewater 48 h before COVID-19 clinical tests and 96 h before hospitalizations PM D'Aoust, TE Graber, E Mercier, D Montpetit, I Alexandrov, N Neault, ... Science of The Total Environment 770, 145319, 2021 | 177 | 2021 |
| Gut microbial dysbiosis is associated with altered hepatic functions and serum metabolites in chronic hepatitis B patients J Wang, Y Wang, X Zhang, J Liu, Q Zhang, Y Zhao, J Peng, Q Feng, J Dai, ... Frontiers in microbiology 8, 2222, 2017 | 166 | 2017 |
| MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota X Zhang, Z Ning, J Mayne, JI Moore, J Li, J Butcher, SA Deeke, R Chen, ... Microbiome 4, 1-12, 2016 | 164 | 2016 |
| Proteogenomic characterization identifies clinically relevant subgroups of intrahepatic cholangiocarcinoma L Dong, D Lu, R Chen, Y Lin, H Zhu, Z Zhang, S Cai, P Cui, G Song, ... Cancer cell 40 (1), 70-87. e15, 2022 | 145 | 2022 |
| MetaLab: an automated pipeline for metaproteomic data analysis K Cheng, Z Ning, X Zhang, L Li, B Liao, J Mayne, A Stintzi, D Figeys Microbiome 5, 1-10, 2017 | 110 | 2017 |
| Structural changes of gut microbiota in a rat non-alcoholic fatty liver disease model treated with a Chinese herbal formula X Yin, J Peng, L Zhao, Y Yu, X Zhang, P Liu, Q Feng, Y Hu, X Pang Systematic and Applied Microbiology 36 (3), 188-196, 2013 | 101 | 2013 |
| Assessing the impact of protein extraction methods for human gut metaproteomics X Zhang, L Li, J Mayne, Z Ning, A Stintzi, D Figeys Journal of proteomics 180, 120-127, 2018 | 100 | 2018 |
| Bioleaching of arsenic from medicinal realgar by pure and mixed cultures J Zhang, X Zhang, Y Ni, X Yang, H Li Process biochemistry 42 (9), 1265-1271, 2007 | 96 | 2007 |
| An in vitro model maintaining taxon-specific functional activities of the gut microbiome L Li, E Abou-Samra, Z Ning, X Zhang, J Mayne, J Wang, K Cheng, ... Nature communications 10 (1), 4146, 2019 | 90 | 2019 |
| Proteomic analysis of ascending colon biopsies from a paediatric inflammatory bowel disease inception cohort identifies protein biomarkers that differentiate Crohn's disease … AE Starr, SA Deeke, Z Ning, CK Chiang, X Zhang, W Mottawea, ... Gut 66 (9), 1573-1583, 2017 | 84 | 2017 |
| Targeting the human genome–microbiome axis for drug discovery: inspirations from global systems biology and traditional Chinese medicine L Zhao, JK Nicholson, A Lu, Z Wang, H Tang, E Holmes, J Shen, X Zhang, ... Journal of proteome research 11 (7), 3509-3519, 2012 | 80 | 2012 |
| Bottom-up proteomics (2013–2015): keeping up in the era of systems biology J Mayne, Z Ning, X Zhang, AE Starr, R Chen, S Deeke, CK Chiang, B Xu, ... Analytical chemistry 88 (1), 95-121, 2016 | 78 | 2016 |
| Deep metaproteomics approach for the study of human microbiomes X Zhang, W Chen, Z Ning, J Mayne, D Mack, A Stintzi, R Tian, D Figeys Analytical chemistry 89 (17), 9407-9415, 2017 | 76 | 2017 |
| Perspective and guidelines for metaproteomics in microbiome studies X Zhang, D Figeys Journal of proteome research 18 (6), 2370-2380, 2019 | 71 | 2019 |
