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Velin Z. Spassov
Velin Z. Spassov
Principal Scientist
Verified email at accelrys.com
Title
Cited by
Cited by
Year
Electrostatic properties of two porin channels from Escherichia coli
A Karshikoff, V Spassov, SW Cowan, R Ladenstein, T Schirmer
Journal of molecular biology 240 (4), 372-384, 1994
2541994
The optimization of protein‐solvent interactions: Thermostability and the role of hydrophobic and electrostatic interactions
VZ Spassov, AD Karshikoff, R Ladenstein
Protein science 4 (8), 1516-1527, 1995
1981995
Introducing an implicit membrane in generalized Born/solvent accessibility continuum solvent models
VZ Spassov, L Yan, S Szalma
The Journal of Physical Chemistry B 106 (34), 8726-8738, 2002
1962002
Fully automated molecular mechanics based induced fit protein− ligand docking method
J Koska, VZ Spassov, AJ Maynard, L Yan, N Austin, PK Flook, ...
Journal of chemical information and modeling 48 (10), 1965-1973, 2008
1832008
LOOPER: a molecular mechanics-based algorithm for protein loop prediction
VZ Spassov, PK Flook, L Yan
Protein Engineering, Design & Selection 21 (2), 91-100, 2008
1532008
A fast and accurate computational approach to protein ionization
VZ Spassov, L Yan
Protein Science 17 (11), 1955-1970, 2008
1502008
pKa calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin
VZ Spassov, H Luecke, K Gerwert, D Bashford
Journal of molecular biology 312 (1), 203-219, 2001
1472001
The dominant role of side‐chain backbone interactions in structural realization of amino acid code. ChiRotor: a side‐chain prediction algorithm based on side‐chain backbone …
VZ Spassov, L Yan, PK Flook
Protein Science 16 (3), 494-506, 2007
1222007
Optimization of the electrostatic interactions in proteins of different functional and folding type
VZ Spassov, AD Karshikoff, R Ladenstein
Protein Science 3 (9), 1556-1569, 1994
781994
pH‐selective mutagenesis of protein–protein interfaces: In silico design of therapeutic antibodies with prolonged half‐life
VZ Spassov, L Yan
Proteins: Structure, Function, and Bioinformatics 81 (4), 704-714, 2013
652013
Electrostatic interactions in proteins. A theoretical analysis of lysozyme ionization
VZ Spassov, AD Karshikov, BP Atanasov
Biochimica et Biophysica Acta (BBA)-Protein Structure and Molecular …, 1989
601989
Multiple‐site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach
VZ Spassov, D Bashford
Journal of computational chemistry 20 (11), 1091-1111, 1999
531999
Optimization of the electrostatic interactions between ionized groups and peptide dipoles in proteins
R Ladenstein, AD Karshikoff, VZ Spassov
Protein science 6 (6), 1190-1196, 1997
421997
Electrostatic coupling to pH‐titrating sites as a source of cooperativity in protein‐ligand binding
V Spassov, D Bashford
Protein science 7 (9), 2012-2025, 1998
251998
A pH‐dependent computational approach to the effect of mutations on protein stability
VZ Spassov, L Yan
Journal of Computational Chemistry 37 (29), 2573-2587, 2016
222016
Spatial optimization of electrostatic interactions between the ionized groups in globular proteins
VZ Spassov, BP Atanasov
Proteins: Structure, Function, and Bioinformatics 19 (3), 222-229, 1994
211994
A hidden Markov model with molecular mechanics energy-scoring function for transmembrane helix prediction
WJ Zheng, VZ Spassov, L Yan, PK Flook, S Szalma
Computational Biology and Chemistry 28 (4), 265-274, 2004
172004
Structural modeling and electrostatic properties of aspartate transcarbamylase from Saccharomyces cerevisiae
BO Villoutreix, VZ Spassov, BP Atanasov, G Hervé, MM Ladjimi
Proteins: Structure, Function, and Bioinformatics 19 (3), 230-243, 1994
161994
Theoretical model and computer simulation of excitation-contraction coupling of mammalian cardiac muscle
AP Michailova, VZ Spassov
Journal of molecular and cellular cardiology 24 (1), 97-104, 1992
101992
Computer simulation of excitation-contraction coupling in cardiac muscle. A study of the regulatory role of calcium binding to troponin C
A Michailova, V Spassov
General Physiology and Biophysics 16, 29-38, 1997
61997
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