Electrostatic properties of two porin channels from Escherichia coli A Karshikoff, V Spassov, SW Cowan, R Ladenstein, T Schirmer Journal of molecular biology 240 (4), 372-384, 1994 | 254 | 1994 |
The optimization of protein‐solvent interactions: Thermostability and the role of hydrophobic and electrostatic interactions VZ Spassov, AD Karshikoff, R Ladenstein Protein science 4 (8), 1516-1527, 1995 | 198 | 1995 |
Introducing an implicit membrane in generalized Born/solvent accessibility continuum solvent models VZ Spassov, L Yan, S Szalma The Journal of Physical Chemistry B 106 (34), 8726-8738, 2002 | 196 | 2002 |
Fully automated molecular mechanics based induced fit protein− ligand docking method J Koska, VZ Spassov, AJ Maynard, L Yan, N Austin, PK Flook, ... Journal of chemical information and modeling 48 (10), 1965-1973, 2008 | 183 | 2008 |
LOOPER: a molecular mechanics-based algorithm for protein loop prediction VZ Spassov, PK Flook, L Yan Protein Engineering, Design & Selection 21 (2), 91-100, 2008 | 153 | 2008 |
A fast and accurate computational approach to protein ionization VZ Spassov, L Yan Protein Science 17 (11), 1955-1970, 2008 | 150 | 2008 |
pKa calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin VZ Spassov, H Luecke, K Gerwert, D Bashford Journal of molecular biology 312 (1), 203-219, 2001 | 147 | 2001 |
The dominant role of side‐chain backbone interactions in structural realization of amino acid code. ChiRotor: a side‐chain prediction algorithm based on side‐chain backbone … VZ Spassov, L Yan, PK Flook Protein Science 16 (3), 494-506, 2007 | 122 | 2007 |
Optimization of the electrostatic interactions in proteins of different functional and folding type VZ Spassov, AD Karshikoff, R Ladenstein Protein Science 3 (9), 1556-1569, 1994 | 78 | 1994 |
pH‐selective mutagenesis of protein–protein interfaces: In silico design of therapeutic antibodies with prolonged half‐life VZ Spassov, L Yan Proteins: Structure, Function, and Bioinformatics 81 (4), 704-714, 2013 | 65 | 2013 |
Electrostatic interactions in proteins. A theoretical analysis of lysozyme ionization VZ Spassov, AD Karshikov, BP Atanasov Biochimica et Biophysica Acta (BBA)-Protein Structure and Molecular …, 1989 | 60 | 1989 |
Multiple‐site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach VZ Spassov, D Bashford Journal of computational chemistry 20 (11), 1091-1111, 1999 | 53 | 1999 |
Optimization of the electrostatic interactions between ionized groups and peptide dipoles in proteins R Ladenstein, AD Karshikoff, VZ Spassov Protein science 6 (6), 1190-1196, 1997 | 42 | 1997 |
Electrostatic coupling to pH‐titrating sites as a source of cooperativity in protein‐ligand binding V Spassov, D Bashford Protein science 7 (9), 2012-2025, 1998 | 25 | 1998 |
A pH‐dependent computational approach to the effect of mutations on protein stability VZ Spassov, L Yan Journal of Computational Chemistry 37 (29), 2573-2587, 2016 | 22 | 2016 |
Spatial optimization of electrostatic interactions between the ionized groups in globular proteins VZ Spassov, BP Atanasov Proteins: Structure, Function, and Bioinformatics 19 (3), 222-229, 1994 | 21 | 1994 |
A hidden Markov model with molecular mechanics energy-scoring function for transmembrane helix prediction WJ Zheng, VZ Spassov, L Yan, PK Flook, S Szalma Computational Biology and Chemistry 28 (4), 265-274, 2004 | 17 | 2004 |
Structural modeling and electrostatic properties of aspartate transcarbamylase from Saccharomyces cerevisiae BO Villoutreix, VZ Spassov, BP Atanasov, G Hervé, MM Ladjimi Proteins: Structure, Function, and Bioinformatics 19 (3), 230-243, 1994 | 16 | 1994 |
Theoretical model and computer simulation of excitation-contraction coupling of mammalian cardiac muscle AP Michailova, VZ Spassov Journal of molecular and cellular cardiology 24 (1), 97-104, 1992 | 10 | 1992 |
Computer simulation of excitation-contraction coupling in cardiac muscle. A study of the regulatory role of calcium binding to troponin C A Michailova, V Spassov General Physiology and Biophysics 16, 29-38, 1997 | 6 | 1997 |