Yang Liao
Yang Liao
Bioinformatics and Cancer Genomics Laboratory, ONJCRI
Verified email at
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featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Y Liao, GK Smyth, W Shi
Bioinformatics 30 (7), 923-930, 2014
The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote
Y Liao, GK Smyth, W Shi
Nucleic acids research 41 (10), e108-e108, 2013
The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads
Y Liao, GK Smyth, W Shi
Nucleic acids research 47 (8), e47-e47, 2019
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology 32 (9), 903-914, 2014
Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes
LK Mackay, M Minnich, NAM Kragten, Y Liao, B Nota, C Seillet, A Zaid, ...
Science 352 (6284), 459-463, 2016
The transcriptional regulators IRF4, BATF and IL-33 orchestrate development and maintenance of adipose tissue–resident regulatory T cells
A Vasanthakumar, K Moro, A Xin, Y Liao, R Gloury, S Kawamoto, ...
Nature immunology 16 (3), 276-285, 2015
Transcriptional profiling of mouse B cell terminal differentiation defines a signature for antibody-secreting plasma cells
W Shi, Y Liao, SN Willis, N Taubenheim, M Inouye, DM Tarlinton, ...
Nature immunology 16 (6), 663-673, 2015
Blimp-1 controls plasma cell function through the regulation of immunoglobulin secretion and the unfolded protein response
J Tellier, W Shi, M Minnich, Y Liao, S Crawford, GK Smyth, A Kallies, ...
Nature immunology 17 (3), 323-330, 2016
Transcription factor IRF4 promotes CD8+ T cell exhaustion and limits the development of memory-like T cells during chronic infection
K Man, SS Gabriel, Y Liao, R Gloury, S Preston, DC Henstridge, ...
Immunity 47 (6), 1129-1141. e5, 2017
A molecular threshold for effector CD8+ T cell differentiation controlled by transcription factors Blimp-1 and T-bet
A Xin, F Masson, Y Liao, S Preston, T Guan, R Gloury, M Olshansky, ...
Nature immunology 17 (4), 422-432, 2016
Sex-specific adipose tissue imprinting of regulatory T cells
A Vasanthakumar, D Chisanga, J Blume, R Gloury, K Britt, DC Henstridge, ...
Nature 579 (7800), 581-585, 2020
c-Maf-dependent Treg cell control of intestinal TH17 cells and IgA establishes host–microbiota homeostasis
C Neumann, J Blume, U Roy, PP Teh, A Vasanthakumar, A Beller, Y Liao, ...
Nature Immunology 20 (4), 471-481, 2019
The TNF receptor superfamily-NF-κB axis is critical to maintain effector regulatory T cells in lymphoid and non-lymphoid tissues
A Vasanthakumar, Y Liao, P Teh, MF Pascutti, AE Oja, AL Garnham, ...
Cell reports 20 (12), 2906-2920, 2017
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures
SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ...
Nature communications 5 (1), 5125, 2014
Pax5 loss imposes a reversible differentiation block in B-progenitor acute lymphoblastic leukemia
GJ Liu, L Cimmino, JG Jude, Y Hu, MT Witkowski, MD McKenzie, ...
Genes & development 28 (12), 1337-1350, 2014
Blockade of the co-inhibitory molecule PD-1 unleashes ILC2-dependent antitumor immunity in melanoma
N Jacquelot, C Seillet, M Wang, A Pizzolla, Y Liao, S Hediyeh-Zadeh, ...
Nature immunology 22 (7), 851-864, 2021
Effector regulatory T cell differentiation and immune homeostasis depend on the transcription factor Myb
S Dias, A D’Amico, E Cretney, Y Liao, J Tellier, C Bruggeman, FF Almeida, ...
Immunity 46 (1), 78-91, 2017
Environmental sensing by mature B cells is controlled by the transcription factors PU. 1 and SpiB
SN Willis, J Tellier, Y Liao, S Trezise, A Light, K O’Donnell, ...
Nature communications 8 (1), 1426, 2017
IMiDs prime myeloma cells for daratumumab-mediated cytotoxicity through loss of Ikaros and Aiolos
PL Fedele, SN Willis, Y Liao, MS Low, J Rautela, DH Segal, JN Gong, ...
Blood, The Journal of the American Society of Hematology 132 (20), 2166-2178, 2018
Attenuation of TCR-induced transcription by Bach2 controls regulatory T cell differentiation and homeostasis
T Sidwell, Y Liao, AL Garnham, A Vasanthakumar, R Gloury, J Blume, ...
Nature Communications 11 (1), 252, 2020
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