| Toward automatic reconstruction of a highly resolved tree of life FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork science 311 (5765), 1283-1287, 2006 | 1790 | 2006 |
| SMART 4.0: towards genomic data integration I Letunic, RR Copley, S Schmidt, FD Ciccarelli, T Doerks, J Schultz, ... Nucleic acids research 32 (suppl_1), D142-D144, 2004 | 1187 | 2004 |
| Recent improvements to the SMART domain-based sequence annotation resource I Letunic, L Goodstadt, NJ Dickens, T Doerks, J Schultz, R Mott, ... Nucleic acids research 30 (1), 242-244, 2002 | 786 | 2002 |
| Age-related remodelling of oesophageal epithelia by mutated cancer drivers A Yokoyama, N Kakiuchi, T Yoshizato, Y Nannya, H Suzuki, Y Takeuchi, ... Nature 565 (7739), 312-317, 2019 | 524 | 2019 |
| Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma R Shukla, KR Upton, M Muñoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ... Cell 153 (1), 101-111, 2013 | 431 | 2013 |
| Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways D Gatfield, L Unterholzner, FD Ciccarelli, P Bork, E Izaurralde The EMBO journal 22 (15), 3960-3970, 2003 | 372 | 2003 |
| Computational pan-genomics: status, promises and challenges Briefings in bioinformatics 19 (1), 118-135, 2018 | 323 | 2018 |
| SPG20 is mutated in Troyer syndrome, an hereditary spastic paraplegia H Patel, H Cross, C Proukakis, R Hershberger, P Bork, FD Ciccarelli, ... Nature genetics 31 (4), 347-348, 2002 | 321 | 2002 |
| The Network of Cancer Genes (NCG): a comprehensive catalogue of known and candidate cancer genes from cancer sequencing screens D Repana, J Nulsen, L Dressler, M Bortolomeazzi, SK Venkata, A Tourna, ... Genome biology 20 (1), 1-12, 2019 | 259 | 2019 |
| Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster J Rehwinkel, A Herold, K Gari, T Köcher, M Rode, FL Ciccarelli, M Wilm, ... Nature structural & molecular biology 11 (6), 558-566, 2004 | 252 | 2004 |
| Genome evolution reveals biochemical networks and functional modules C Von Mering, EM Zdobnov, S Tsoka, FD Ciccarelli, JB Pereira-Leal, ... Proceedings of the National Academy of Sciences 100 (26), 15428-15433, 2003 | 199 | 2003 |
| The landscape of selection in 551 esophageal adenocarcinomas defines genomic biomarkers for the clinic AM Frankell, SG Jammula, X Li, G Contino, S Killcoyne, S Abbas, J Perner, ... Nature genetics 51 (3), 506-516, 2019 | 189 | 2019 |
| The identification of a conserved domain in both spartin and spastin, mutated in hereditary spastic paraplegia FD Ciccarelli, C Proukakis, H Patel, H Cross, S Azam, MA Patton, P Bork, ... Genomics 81 (4), 437-441, 2003 | 172 | 2003 |
| Family expansion and gene rearrangements contributed to the functional specialization of PRDM genes in vertebrates I Fumasoni, N Meani, D Rambaldi, G Scafetta, M Alcalay, FD Ciccarelli BMC evolutionary biology 7, 1-11, 2007 | 170 | 2007 |
| Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface F Wang, D Shen, P Yan, K Suzuki | 161 | 2012 |
| NEAT: a domain duplicated in genes near the components of a putative Fe3+siderophore transporter from Gram-positive pathogenic bacteria MA Andrade, FD Ciccarelli, C Perez-Iratxeta, P Bork Genome biology 3, 1-5, 2002 | 159 | 2002 |
| COVID-19 in an international European liver transplant recipient cohort C Becchetti, MF Zambelli, L Pasulo, MF Donato, F Invernizzi, O Detry, ... Gut 69 (10), 1832-1840, 2020 | 149 | 2020 |
| An analysis of IL-36 signature genes and individuals with IL1RL2 knockout mutations validates IL-36 as a psoriasis therapeutic target SK Mahil, M Catapano, P Di Meglio, N Dand, H Ahlfors, IM Carr, CH Smith, ... Science translational medicine 9 (411), eaan2514, 2017 | 146 | 2017 |
| FancyGene: dynamic visualization of gene structures and protein domain architectures on genomic loci D Rambaldi, FD Ciccarelli Bioinformatics 25 (17), 2281-2282, 2009 | 131 | 2009 |
| Lecture notes in computer science (including subseries lecture notes in artificial intelligence and lecture notes in bioinformatics): preface A Roychoudhury, M D'Souza | 130 | 2012 |
