Florence Tama
Florence Tama
Professor of Physics & ITbM Nagoya University, RIKEN Center for Computational Sciences
Verified email at - Homepage
Cited by
Cited by
Conformational change of proteins arising from normal mode calculations
F Tama, YH Sanejouand
Protein engineering 14 (1), 1-6, 2001
Building‐block approach for determining low‐frequency normal modes of macromolecules
F Tama, FX Gadea, O Marques, YH Sanejouand
Proteins: Structure, Function, and Bioinformatics 41 (1), 1-7, 2000
Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy
F Tama, M Valle, J Frank, CL Brooks III
Proceedings of the National Academy of Sciences 100 (16), 9319-9323, 2003
Structure of the E. coli protein-conducting channel bound to a translating ribosome
K Mitra, C Schaffitzel, T Shaikh, F Tama, S Jenni, CL Brooks III, N Ban, ...
Nature 438 (7066), 318-324, 2005
Symmetry, form, and shape: guiding principles for robustness in macromolecular machines
F Tama, CL Brooks III
Annu. Rev. Biophys. Biomol. Struct. 35, 115-133, 2006
Normal mode based flexible fitting of high-resolution structure into low-resolution experimental data from cryo-EM
F Tama, O Miyashita, CL Brooks Iii
Journal of structural biology 147 (3), 315-326, 2004
Flexible multi-scale fitting of atomic structures into low-resolution electron density maps with elastic network normal mode analysis
F Tama, O Miyashita, CL Brooks III
Journal of molecular biology 337 (4), 985-999, 2004
The mechanism and pathway of pH induced swelling in cowpea chlorotic mottle virus
F Tama, CL Brooks III
Journal of molecular biology 318 (3), 733-747, 2002
Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory
F Tama, W Wriggers, CL Brooks III
Journal of molecular biology 321 (2), 297-305, 2002
Diversity and identity of mechanical properties of icosahedral viral capsids studied with elastic network normal mode analysis
F Tama, CL Brooks III
Journal of molecular biology 345 (2), 299-314, 2005
Mega-Dalton biomolecular motion captured from electron microscopy reconstructions
P Chacon, F Tama, W Wriggers
Journal of molecular biology 326 (2), 485-492, 2003
Three-dimensional structure of the anthrax toxin pore inserted into lipid nanodiscs and lipid vesicles
H Katayama, J Wang, F Tama, L Chollet, EP Gogol, RJ Collier, MT Fisher
Proceedings of the National Academy of Sciences 107 (8), 3453-3457, 2010
Flexible fitting of high-resolution x-ray structures into cryoelectron microscopy maps using biased molecular dynamics simulations
M Orzechowski, F Tama
Biophysical journal 95 (12), 5692-5705, 2008
Removal of Divalent Cations Induces Structural Transitions in Red Clover Necrotic Mosaic Virus, Revealing a Potential Mechanism for RNA Release
MB Sherman, RH Guenther, F Tama, TL Sit, CL Brooks, AM Mikhailov, ...
Journal of virology 80 (21), 10395-10406, 2006
Cell-based screen identifies a new potent and highly selective CK2 inhibitor for modulation of circadian rhythms and cancer cell growth
T Oshima, Y Niwa, K Kuwata, A Srivastava, T Hyoda, Y Tsuchiya, ...
Science advances 5 (1), eaau9060, 2019
Iterative elastic 3D-to-2D alignment method using normal modes for studying structural dynamics of large macromolecular complexes
Q Jin, COS Sorzano, JM de La Rosa-Trevín, JR Bilbao-Castro, ...
Structure 22 (3), 496-506, 2014
Excited states of ribosome translocation revealed through integrative molecular modeling
PC Whitford, A Ahmed, Y Yu, SP Hennelly, F Tama, CMT Spahn, ...
Proceedings of the National Academy of Sciences 108 (47), 18943-18948, 2011
Role of computational methods in going beyond X-ray crystallography to explore protein structure and dynamics
A Srivastava, T Nagai, A Srivastava, O Miyashita, F Tama
International journal of molecular sciences 19 (11), 3401, 2018
Macromolecular structures probed by combining single-shot free-electron laser diffraction with synchrotron coherent X-ray imaging
M Gallagher-Jones, Y Bessho, S Kim, J Park, S Kim, D Nam, C Kim, Y Kim, ...
Nature communications 5 (1), 3798, 2014
The 13 Å Structure of a chaperonin GroEL–protein substrate complex by cryo-electron microscopy
S Falke, F Tama, CL Brooks III, EP Gogol, MT Fisher
Journal of molecular biology 348 (1), 219-230, 2005
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