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Tom S Weber
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Inhibition of endosteal vascular niche remodeling rescues hematopoietic stem cell loss in AML
D Duarte, ED Hawkins, O Akinduro, H Ang, K De Filippo, IY Kong, ...
Cell stem cell 22 (1), 64-77. e6, 2018
3032018
Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments
L Tian, X Dong, S Freytag, KA Lê Cao, S Su, A JalalAbadi, ...
Nature methods 16 (6), 479-487, 2019
2912019
Barcoding reveals complex clonal behavior in patient-derived xenografts of metastatic triple negative breast cancer
D Merino, TS Weber, A Serrano, F Vaillant, K Liu, B Pal, L Di Stefano, ...
Nature communications 10 (1), 766, 2019
1342019
Non-genetic determinants of malignant clonal fitness at single-cell resolution
KA Fennell, D Vassiliadis, EYN Lam, LG Martelotto, JJ Balic, S Hollizeck, ...
Nature 601 (7891), 125-131, 2022
1002022
Proliferation dynamics of acute myeloid leukaemia and haematopoietic progenitors competing for bone marrow space
O Akinduro, TS Weber, H Ang, MLR Haltalli, N Ruivo, D Duarte, ...
Nature communications 9 (1), 1-12, 2018
932018
Quantifying the length and variance of the eukaryotic cell cycle phases by a stochastic model and dual nucleoside pulse labelling
TS Weber, I Jaehnert, C Schichor, M Or-Guil, J Carneiro
PLoS computational biology 10 (7), e1003616, 2014
702014
Replicative history marks transcriptional and functional disparity in the CD8+ T cell memory pool
K Bresser, L Kok, AC Swain, LA King, L Jacobs, TS Weber, L Perié, ...
Nature immunology 23 (5), 791-801, 2022
432022
Clonal multi-omics reveals Bcor as a negative regulator of emergency dendritic cell development
L Tian, S Tomei, J Schreuder, TS Weber, D Amann-Zalcenstein, DS Lin, ...
Immunity 54 (6), 1338-1351. e9, 2021
362021
Single-cell analyses reveal the clonal and molecular aetiology of Flt3L-induced emergency dendritic cell development
DS Lin, L Tian, S Tomei, D Amann-Zalcenstein, TM Baldwin, TS Weber, ...
Nature Cell Biology 23 (3), 219-231, 2021
322021
Broad volume distributions indicate nonsynchronized growth and suggest sudden collapses of germinal center B cell populations
N Wittenbrink, TS Weber, A Klein, AA Weiser, W Zuschratter, M Sibila, ...
The journal of immunology 184 (3), 1339-1347, 2010
292010
Site-specific recombinatorics: in situ cellular barcoding with the Cre Lox system
TS Weber, M Dukes, DC Miles, SP Glaser, SH Naik, KR Duffy
BMC Systems Biology 10, 1-13, 2016
242016
Cell cycle-associated CXCR4 expression in germinal center B cells and its implications on affinity maturation
TS Weber
Frontiers in Immunology 9, 1313, 2018
192018
In vivo clonal tracking reveals evidence of haemangioblast and haematomesoblast contribution to yolk sac haematopoiesis
C Biben, TS Weber, KS Potts, J Choi, DC Miles, A Carmagnac, T Sargeant, ...
Nature Communications 14 (1), 41, 2023
162023
Inferring average generation via division-linked labeling
TS Weber, L Perié, KR Duffy
Journal of mathematical biology 73, 491-523, 2016
112016
A risk-reward examination of sample multiplexing reagents for single cell RNA-Seq
DV Brown, CJA Anttila, L Ling, P Grave, TM Baldwin, R Munnings, ...
Genomics 116 (2), 110793, 2024
52024
Experimental and spontaneous metastasis assays can result in divergence in clonal architecture
A Serrano, T Weber, J Berthelet, F El-Saafin, S Gadipally, ...
Communications Biology 6 (1), 821, 2023
32023
Sample path properties of the average generation of a Bellman–Harris process
G Meli, TS Weber, KR Duffy
Journal of mathematical biology 79, 673-704, 2019
32019
LoxCode in vivo barcoding resolves epiblast clonal fate to fetal organs
TS Weber, C Biben, DC Miles, S Glaser, S Tomei, S Zhang, PPL Tam, ...
bioRxiv, 2023.01. 02.522501, 2023
22023
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