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Xiangqin Cui
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Year
Microarray data analysis: from disarray to consolidation and consensus
DB Allison, X Cui, GP Page, M Sabripour
Nature reviews genetics 7 (1), 55-65, 2006
17512006
Statistical tests for differential expression in cDNA microarray experiments
X Cui, GA Churchill
Genome biology 4, 1-10, 2003
12582003
Repeatability of published microarray gene expression analyses
JPA Ioannidis, DB Allison, CA Ball, I Coulibaly, X Cui, AC Culhane, ...
Nature genetics 41 (2), 149-155, 2009
6452009
Improved statistical tests for differential gene expression by shrinking variance components estimates
X Cui, JTG Hwang, J Qiu, NJ Blades, GA Churchill
Biostatistics 6 (1), 59-75, 2005
6282005
The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize
X Cui, RP Wise, PS Schnable
Science 272 (5266), 1334-1336, 1996
5071996
MAANOVA: a software package for the analysis of spotted cDNA microarray experiments
H Wu, MK Kerr, X Cui, GA Churchill
The analysis of gene expression data: methods and software, 313-341, 2003
4152003
Mitochondrial aldehyde dehydrogenase activity is required for male fertility in maize
F Liu, X Cui, HT Horner, H Weiner, PS Schnable
The Plant Cell 13 (5), 1063-1078, 2001
3232001
Design and validation issues in RNA-seq experiments
Z Fang, X Cui
Briefings in bioinformatics 12 (3), 280-287, 2011
2942011
Altered microbiota associated with abnormal humoral immune responses to commensal organisms in enthesitis-related arthritis
ML Stoll, R Kumar, CD Morrow, EJ Lefkowitz, X Cui, A Genin, RQ Cron, ...
Arthritis research & therapy 16, 1-10, 2014
2152014
Transformations for cDNA microarray data
X Cui, MK Kerr, GA Churchill
Statistical applications in genetics and molecular biology 2 (1), 2003
2142003
Negative binomial mixed models for analyzing microbiome count data
X Zhang, H Mallick, Z Tang, L Zhang, X Cui, AK Benson, N Yi
BMC bioinformatics 18, 1-10, 2017
1582017
Expression signature of IFN/STAT1 signaling genes predicts poor survival outcome in glioblastoma multiforme in a subtype-specific manner
CW Duarte, CD Willey, D Zhi, X Cui, JJ Harris, LK Vaughan, T Mehta, ...
PloS one 7 (1), e29653, 2012
1542012
Differential genomic responses in old vs. young humans despite similar levels of modest muscle damage after resistance loading
AE Thalacker-Mercer, LJ Dell'Italia, X Cui, JM Cross, MM Bamman
Physiological genomics 40 (3), 141-149, 2010
1322010
Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy
A Thalacker-Mercer, M Stec, X Cui, J Cross, S Windham, M Bamman
Physiological genomics 45 (12), 499-507, 2013
1262013
Arabidopsis extra large G-protein 2 (XLG2) interacts with the Gβ subunit of heterotrimeric G protein and functions in disease resistance
H Zhu, GJ Li, L Ding, X Cui, H Berg, SM Assmann, Y Xia
Molecular plant 2 (3), 513-525, 2009
1222009
Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data
S Barnes, HP Benton, K Casazza, SJ Cooper, X Cui, X Du, J Engler, ...
Journal of Mass Spectrometry 51 (7), 461-475, 2016
1102016
Innate transcriptional networks activated in bladder in response to uropathogenic Escherichia coli drive diverse biological pathways and rapid synthesis of IL-10 for defense …
BL Duell, AJ Carey, CK Tan, X Cui, RI Webb, M Totsika, MA Schembri, ...
The Journal of Immunology 188 (2), 781-792, 2012
1102012
Overexpression of innate immune response genes in a model of recessive polycystic kidney disease
M Mrug, J Zhou, Y Woo, X Cui, AJ Szalai, J Novak, GA Churchill, ...
Kidney international 73 (1), 63-76, 2008
1042008
Characterization of the aldehyde dehydrogenase gene families of Zea mays and Arabidopsis
DS Skibbe, F Liu, TJ Wen, MD Yandeau, X Cui, J Cao, CR Simmons, ...
Plant Molecular Biology 48, 751-764, 2002
1042002
The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle
X Wu, J Wang, X Cui, L Maianu, B Rhees, J Rosinski, WV So, SM Willi, ...
Endocrine 31, 5-17, 2007
882007
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Articles 1–20