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Yimeng Yin
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The human transcription factors
SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin, M Albu, X Chen, ...
Cell 172 (4), 650-665, 2018
18342018
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Y Yin, E Morgunova, A Jolma, E Kaasinen, B Sahu, S Khund-Sayeed, ...
Science 356 (6337), eaaj2239, 2017
8632017
DNA-dependent formation of transcription factor pairs alters their binding specificity
A Jolma, Y Yin, KR Nitta, K Dave, A Popov, M Taipale, M Enge, T Kivioja, ...
Nature 527 (7578), 384-388, 2015
4742015
The interaction landscape between transcription factors and the nucleosome
F Zhu, L Farnung, E Kaasinen, B Sahu, Y Yin, B Wei, SO Dodonova, ...
Nature 562 (7725), 76-81, 2018
2272018
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution
KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ...
elife 4, e04837, 2015
2012015
Multiparameter functional diversity of human C2H2 zinc finger proteins
FW Schmitges, E Radovani, HS Najafabadi, M Barazandeh, LF Campitelli, ...
Genome research 26 (12), 1742-1752, 2016
1342016
Interleukin-6 disrupts blood-testis barrier through inhibiting protein degradation or activating phosphorylated ERK in Sertoli cells
H Zhang, Y Yin, G Wang, Z Liu, L Liu, F Sun
Scientific reports 4 (1), 4260, 2014
1032014
Transcription factor family‐specific DNA shape readout revealed by quantitative specificity models
L Yang, Y Orenstein, A Jolma, Y Yin, J Taipale, R Shamir, R Rohs
Molecular systems biology 13 (2), 910, 2017
962017
Structural insights into the DNA-binding specificity of E2F family transcription factors
E Morgunova, Y Yin, A Jolma, K Dave, B Schmierer, A Popov, N Eremina, ...
Nature communications 6 (1), 10050, 2015
572015
Systematic analysis of binding of transcription factors to noncoding variants
J Yan, Y Qiu, AM Ribeiro dos Santos, Y Yin, YE Li, N Vinckier, N Nariai, ...
Nature 591 (7848), 147-151, 2021
562021
Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences
A Jolma, J Zhang, E Mondragón, E Morgunova, T Kivioja, KU Laverty, ...
Genome research 30 (7), 962-973, 2020
472020
Steroidogenic factor-1 is required for TGF-β3-mediated 17β-estradiol synthesis in mouse ovarian granulosa cells
N Liang, Y Xu, Y Yin, G Yao, H Tian, G Wang, J Lian, Y Wang, F Sun
Endocrinology 152 (8), 3213-3225, 2011
402011
Variation in crossover interference levels on individual chromosomes from human males
J Lian, Y Yin, M Oliver-Bonet, T Liehr, E Ko, P Turek, F Sun, RH Martin
Human molecular genetics 17 (17), 2583-2594, 2008
372008
Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima
E Morgunova, Y Yin, PK Das, A Jolma, F Zhu, A Popov, Y Xu, L Nilsson, ...
Elife 7, e32963, 2018
282018
Nuclear export factor 3 is involved in regulating the expression of TGF-β3 in an mRNA export activity-independent manner in mouse Sertoli cells
Y Yin, G Wang, N Liang, H Zhang, Z Liu, W Li, F Sun
Biochemical Journal 452 (1), 67-78, 2013
192013
Knockdown of TrkA in cumulus oocyte complexes (COCs) inhibits EGF-induced cumulus expansion by down-regulation of IL-6
Y Wang, N Liang, G Yao, H Tian, Y Zhai, Y Yin, F Sun
Molecular and cellular endocrinology 382 (2), 804-813, 2014
172014
Subfertile effects of quinestrol and levonorgestrel in male rats
M Liu, X Wan, Y Yin, Y Li, F Sun, Z Zhang, Y Wang
Reproduction, Fertility and Development 24 (2), 297-308, 2012
172012
A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
L Fan, T Wang, C Hua, W Sun, X Li, L Grunwald, J Liu, N Wu, X Shao, ...
Nature Communications 11 (1), 4947, 2020
142020
Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets
J Toivonen, T Kivioja, A Jolma, Y Yin, J Taipale, E Ukkonen
Nucleic acids research 46 (8), e44-e44, 2018
132018
Simultaneous profiling of histone modifications and DNA methylation via nanopore sequencing
X Yue, Z Xie, M Li, K Wang, X Li, X Zhang, J Yan, Y Yin
Nature Communications 13 (1), 7939, 2022
2022
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