Ramachandra M Bhaskara

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Gerhard HummerMax Planck Institute of BiophysicsVerified email at biophys.mpg.de
N. SrinivasanProfessor, Molecular Biophysics Unit, Indian Institute of ScienceVerified email at iisc.ac.in
Martin VögeleSchrödinger Inc.Verified email at schrodinger.com
Alexandre G. de BrevernSenior Researcher INSERM - Université Paris CitéVerified email at univ-paris-diderot.fr
Marc SiggelPostdoctoral Fellow (EIPOD), EMBL HamburgVerified email at embl-hamburg.de
Daniel J MullerETH Zurich, Department of Biosystems Science and EngineeringVerified email at bsse.ethz.ch
Misha KudryashevMax Delbrück Center for Molecular MedicineVerified email at mdc-berlin.de
Javier Garcia-PardoInvestigador Juan de la Cierva, IBB-Universitat Autonoma de BarcelonaVerified email at uab.cat
Jürgen KöfingerMax Planck Institute of BiophysicsVerified email at biophys.mpg.de
Pierrick Craveur, PhDSARTORIUS, Corporate Research, Research ScientistVerified email at sartorius.com
Bohdan SchneiderHead of Laboratory of Biomolecular Rcognition and Dir, Institute of Biotechnology, Czech AcademyVerified email at ibt.cas.cz
Stéphane TéletchéaUS2B, Nantes University, FranceVerified email at univ-nantes.fr
Amine GhozlaneInstitut PasteurVerified email at pasteur.fr
Jonathan BarnoudCentro Singular de Investigación en Tecnoloxías Intelixentes (CiTIUS) Universidade de Santiago deVerified email at usc.es
Guilhem FaureBroad Institute of MIT and HarvardVerified email at broadinstitute.org
Gnanavel MutharasuDoctoral Student, Tampere University of TechnologyVerified email at tut.fi
Anne SimonsenUniversity of OsloVerified email at medisin.uio.no
Lina HerhausTeam Leader Immune Signaling, Goethe University Frankfurt, GermanyVerified email at em.uni-frankfurt.de
Juliette MartinCNRS UMR 5086Verified email at ibcp.fr
Sudhir ThakurelaMassachusetts General Hospital / Harvard Medical SchoolVerified email at harvard.edu

Ramachandra M Bhaskara

Team Leader (Computational Cell Biology), Institute of Biochemistry II, Goethe University Frankfurt

Verified email at med.uni-frankfurt.de - Homepage

Theoretical Biophysics Membrane Remodeling Bioinformatics Data Sciences


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Curvature induction and membrane remodeling by FAM134B reticulon homology domain assist selective ER-phagy RM Bhaskara, P Grumati, J Garcia-Padro, S Kalayil, A Cuvrrabias-Pinto, ... Nature Communications 10 (1), 2370, 2019	141	2019
Stability of domain structures in multi-domain proteins RM Bhaskara, N Srinivasan Scientific reports 1 (1), 40, 2011	103	2011
Protein flexibility in the light of structural alphabets P Craveur, AP Joseph, J Esque, TJ Narwani, F Noël, N Shinada, ... Frontiers in molecular biosciences 2, 20, 2015	85	2015
Membrane perforation by the pore-forming toxin pneumolysin M Vögele, RM Bhaskara, E Mulvihill, K van Pee, Ö Yildiz, W Kühlbrandt, ... Proceedings of the National Academy of Sciences 116 (27), 13352-13357, 2019	80	2019
TBK1-mediated phosphorylation of LC3C and GABARAP-L2 controls autophagosome shedding by ATG4 protease. L Herhaus, RM Bhaskara, AH Lystad, U Gestal-Mato, A Covarrubias-Pinto, ... EMBO Rep., 634519, 2019	56	2019
Role of FAM134 paralogues in endoplasmic reticulum remodeling, ER‐phagy, and collagen quality control A Reggio, V Buonomo, R Berkane, RM Bhaskara, M Tellechea, I Peluso, ... EMBO reports 22 (9), e52289, 2021	46	2021
Understanding the role of domain–domain linkers in the spatial orientation of domains in multi-domain proteins RM Bhaskara, AG de Brevern, N Srinivasan Journal of Biomolecular Structure and Dynamics 31 (12), 1467-1480, 2013	45	2013
Carbon nanotubes mediate fusion of lipid vesicles RM Bhaskara, SM Linker, M Vögele, J Köfinger, G Hummer ACS nano 11 (2), 1273-1280, 2017	36	2017
Roles of residues in the interface of transient protein-protein complexes before complexation LS Swapna, RM Bhaskara, J Sharma, N Srinivasan Scientific reports 2 (1), 334, 2012	33	2012
Perception of ultraviolet light by crab spiders and its role in selection of hunting sites RM Bhaskara, CM Brijesh, S Ahmed, RM Borges Journal of Comparative Physiology A 195, 409-417, 2009	30	2009
Cryo-EM structure of the bifunctional secretin complex of Thermus thermophilus E D'Imprima, R Salzer, RM Bhaskara, R Sanchez, I Rose, L Kirchner, ... Elife 6, e30483, 2017	28	2017
Membrane fusion and drug delivery with carbon nanotube porins NT Ho, M Siggel, KV Camacho, RM Bhaskara, JM Hicks, YC Yao, ... Proceedings of the National Academy of Sciences 118 (19), e2016974118, 2021	25	2021
Disulfide conformation and design at helix N‐termini S Indu, ST Kumar, S Thakurela, M Gupta, RM Bhaskara, C Ramakrishnan, ... Proteins: Structure, Function, and Bioinformatics 78 (5), 1228-1242, 2010	17	2010
FAM134B-RHD Protein Clustering Drives Spontaneous Budding of Asymmetric Membranes M Siggel, RM Bhaskara, MK Moesser, I D̵ikić, G Hummer J. Phys. Chem. Lett. 12 (7), 1926–1931, 2021	16	2021
CLAP: A web-server for automatic classification of proteins with special reference to multi-domain proteins M Gnanavel, P Mehrotra, R Ramaswamy, J Martin, S Narayanaswamy, ... BMC Bioinformatics 15 (343), 2014	13	2014
Phospholipid Scramblases Remodel the Shape of Asymmetric Membranes M Siggel, RM Bhaskara, G Hummer J. Phys. Chem. Lett. 10 (20), 6351-6354, 2019	12	2019
Ubiquitination regulates ER-phagy and remodelling of endoplasmic reticulum A González, A Covarrubias-Pinto, RM Bhaskara, M Glogger, SK Kuncha, ... Nature, 1-8, 2023	8	2023
Structural and mechanistic insights into human splicing factor SF3b complex derived using an integrated approach guided by the cryo-EM density maps R Rakesh, AP Joseph, RM Bhaskara, N Srinivasan RNA biology 13 (10), 1025-1040, 2016	8	2016
Accurate prediction of interfacial residues in two‐domain proteins using evolutionary information: implications for three‐dimensional modeling RM Bhaskara, A Padhi, N Srinivasan Proteins: Structure, Function, and Bioinformatics 82 (7), 1219-1234, 2014	8	2014
The relationship between classification of multi-domain proteins using an alignment-free approach and their functions: a case study with immunoglobulins RM Bhaskara, P Mehrotra, R Rakshambikai, M Gnanavel, J Martin, ... Molecular BioSystems 10 (5), 1082-1093, 2014	7	2014

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