Alexander A Morgan

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Atul J. ButteDirector, Bakar Computational Health Sciences Institute, University of California, San FranciscoVerified email at ucsf.edu
Rong ChenDirector of Clinical Genome Informatics & Assistant Professor, Mount Sinai School of MedicineVerified email at mssm.edu
Joel DudleyInstitute Director and Associate Professor, Icahn School of Medicine at Mount SinaiVerified email at mssm.edu
Marc ColosimoSenior Customer Solutions Architect at Paradigm4Verified email at paradigm4.com
Marina SirotaAssociate Professor, Bakar Computational Health Sciences Institute, UCSFVerified email at ucsf.edu
Purvesh KhatriStanford UniversityVerified email at stanford.edu
Anne BrunetProfessor of Genetics, Stanford UniversityVerified email at stanford.edu
Chirag J PatelAssociate Professor of Biomedical Informatics, Harvard UniversityVerified email at hms.harvard.edu
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Verified email at bsc.es
Erik CoronaHarvard UniversityVerified email at hms.harvard.edu
Julien SageProfessor of Pediatrics and Genetics, Stanford UniversityVerified email at stanford.edu
E. Alejandro Sweet-CorderoAssociate ProfessorVerified email at stanford.edu
Martin Krallinger*Head of Text Mining Unit, Barcelona Supercomputing Center (BSC-CNS)Verified email at bsc.es
Jörg HakenbergIllumina, Inc.Verified email at illumina.com
Hongfang LiuProfessor of Biomedical Informatics, Mayo ClinicVerified email at mayo.edu
Anna DivoliAssociate Director, Data & Analytics, Lighthouse KPMGVerified email at kpmg.co.nz
Aaron CohenProfessor, Oregon Health & Science UniversityVerified email at ohsu.edu
Patrick RuchProfessor at HES-SO Geneva & SIB Swiss Institute of BioinformaticsVerified email at hesge.ch
Michael KrauthammerUniversity of ZurichVerified email at uzh.ch
Zhiyong LuDeputy Director for Literature Search, NCBI; Senior Investigator, NCBI-NLMVerified email at nih.gov

Alexander A Morgan

Khosla Ventures

Verified email at stanford.edu - Homepage

Bioinformatics Genetics Statistics Artificial Intelligence Precision Medicine


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Discovery and preclinical validation of drug indications using compendia of public gene expression data M Sirota, JT Dudley, J Kim, AP Chiang, AA Morgan, A Sweet-Cordero, ... Science translational medicine 3 (96), 96ra77-96ra77, 2011	783	2011
Clinical assessment incorporating a personal genome EA Ashley, AJ Butte, MT Wheeler, R Chen, TE Klein, FE Dewey, ... The Lancet 375 (9725), 1525-1535, 2010	764	2010
Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease JT Dudley, M Sirota, M Shenoy, RK Pai, S Roedder, AP Chiang, ... Science translational medicine 3 (96), 96ra76-96ra76, 2011	577	2011
FoxO3 regulates neural stem cell homeostasis VM Renault, VA Rafalski, AA Morgan, DAM Salih, JO Brett, AE Webb, ... Cell stem cell 5 (5), 527-539, 2009	574	2009
Overview of BioCreative II gene normalization AA Morgan, Z Lu, X Wang, AM Cohen, J Fluck, P Ruch, A Divoli, K Fundel, ... Genome biology 9, 1-19, 2008	396	2008
BioCreAtIvE task 1A: gene mention finding evaluation A Yeh, A Morgan, M Colosimo, L Hirschman BMC bioinformatics 6, 1-10, 2005	278	2005
Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge M Krallinger, A Morgan, L Smith, F Leitner, L Tanabe, J Wilbur, ... Genome biology 9 (2), 1-9, 2008	228	2008
Proline: the distribution, frequency, positioning, and common functional roles of proline and polyproline sequences in the human proteome AA Morgan, E Rubenstein PloS one 8 (1), e53785, 2013	227	2013
Evaluation of text data mining for database curation: lessons learned from the KDD Challenge Cup AS Yeh, L Hirschman, AA Morgan Bioinformatics 19 (suppl_1), i331-i339, 2003	223	2003
Overview of BioCreAtIvE task 1B: normalized gene lists L Hirschman, M Colosimo, A Morgan, A Yeh BMC bioinformatics 6 (1), 1-10, 2005	215	2005
A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation P Khatri, S Roedder, N Kimura, K De Vusser, AA Morgan, Y Gong, ... Journal of Experimental Medicine 210 (11), 2205-2221, 2013	213	2013
Rutabaga by any other name: extracting biological names L Hirschman, AA Morgan, AS Yeh Journal of Biomedical Informatics 35 (4), 247-259, 2002	162	2002
Expression-based genome-wide association study links the receptor CD44 in adipose tissue with type 2 diabetes K Kodama, M Horikoshi, K Toda, S Yamada, K Hara, J Irie, M Sirota, ... Proceedings of the National Academy of Sciences 109 (18), 7049-7054, 2012	145	2012
Rapidly retargetable approaches to de-identification in medical records B Wellner, M Huyck, S Mardis, J Aberdeen, A Morgan, L Peshkin, A Yeh, ... Journal of the American Medical Informatics Association 14 (5), 564-573, 2007	144	2007
Identification of an IFN-γ/mast cell axis in a mouse model of chronic asthma M Yu, MR Eckart, AA Morgan, K Mukai, AJ Butte, M Tsai, SJ Galli The Journal of clinical investigation 121 (8), 3133-3143, 2011	143	2011
Type 2 diabetes risk alleles demonstrate extreme directional differentiation among human populations, compared to other diseases R Chen, E Corona, M Sikora, JT Dudley, AA Morgan, A Moreno-Estrada, ... PLoS genetics 8 (4), e1002621, 2012	122	2012
FoxO6 regulates memory consolidation and synaptic function DAM Salih, AJ Rashid, D Colas, L de la Torre-Ubieta, RP Zhu, AA Morgan, ... Genes & development 26 (24), 2780-2801, 2012	119	2012
Gene name identification and normalization using a model organism database AA Morgan, L Hirschman, M Colosimo, AS Yeh, JB Colombe Journal of biomedical informatics 37 (6), 396-410, 2004	116	2004
Translational bioinformatics in the cloud: an affordable alternative JT Dudley, Y Pouliot, R Chen, AA Morgan, AJ Butte Genome medicine 2 (8), 1-6, 2010	106	2010
Integrated multi-cohort transcriptional meta-analysis of neurodegenerative diseases MD Li, TC Burns, AA Morgan, P Khatri Acta neuropathologica communications 2 (1), 1-23, 2014	103	2014

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