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Erik Garrison
Erik Garrison
Assistant Professor, University of Tennessee Health Science Center
Adresă de e-mail confirmată pe uthsc.edu - Pagina de pornire
Titlu
Citat de
Citat de
Anul
A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
150662015
A map of human genome variation from population scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
87822010
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
83062012
Haplotype-based variant detection from short-read sequencing
E Garrison, G Marth
arXiv preprint arXiv:1207.3907, 2012
4431*2012
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
24042015
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
20152022
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
16022021
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
15582020
BamTools: a C++ API and toolkit for analyzing and managing BAM files
DW Barnett, EK Garrison, AR Quinlan, MP Strömberg, GT Marth
Bioinformatics 27 (12), 1691-1692, 2011
9362011
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
7182011
Variation graph toolkit improves read mapping by representing genetic variation in the reference
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
Nature biotechnology 36 (9), 875-879, 2018
5682018
SpeedSeq: ultra-fast personal genome analysis and interpretation
C Chiang, RM Layer, GG Faust, MR Lindberg, DB Rose, EP Garrison, ...
Nature methods 12 (10), 966, 2015
5412015
A global reference for human genetic variation
GP Consortium, A Auton, LD Brooks, RM Durbin, EP Garrison, HM Kang
Nature 526 (7571), 68-74, 2015
4842015
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4452014
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4202013
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
K Shafin, T Pesout, R Lorig-Roach, M Haukness, HE Olsen, C Bosworth, ...
Nature biotechnology 38 (9), 1044-1053, 2020
4052020
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
3812023
Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences
GD Poznik, Y Xue, FL Mendez, TF Willems, A Massaia, MA Wilson Sayres, ...
Nature genetics 48 (6), 593-599, 2016
3592016
MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping
WP Lee, MP Stromberg, A Ward, C Stewart, EP Garrison, GT Marth
PloS one 9 (3), e90581, 2014
3432014
Computational pan-genomics: status, promises and challenges
Briefings in bioinformatics 19 (1), 118-135, 2018
3392018
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