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Bai Zhang
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Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
9232016
High-fat or ethinyl-oestradiol intake during pregnancy increases mammary cancer risk in several generations of offspring
S de Assis, A Warri, MI Cruz, O Laja, Y Tian, B Zhang, Y Wang, ...
Nature Communications 3, 1053, 2012
1472012
Differential dependency network analysis to identify condition-specific topological changes in biological networks
B Zhang, H Li, RB Riggins, M Zhan, J Xuan, Z Zhang, EP Hoffman, ...
Bioinformatics 25 (4), 526-532, 2009
1392009
Overexpression of α (1, 6) fucosyltransferase associated with aggressive prostate cancer
X Wang, J Chen, QK Li, SB Peskoe, B Zhang, C Choi, EA Platz, H Zhang
Glycobiology 24 (10), 935-944, 2014
1252014
CD36 is a matrix metalloproteinase-9 substrate that stimulates neutrophil apoptosis and removal during cardiac remodeling
KY DeLeon-Pennell, Y Tian, B Zhang, CA Cates, RP Iyer, P Cannon, ...
Circulation: Cardiovascular Genetics 9 (1), 14-25, 2016
1002016
Nonlinear system modeling with random matrices: Echo state networks revisited
B Zhang, DJ Miller, Y Wang
Neural Networks and Learning Systems, IEEE Transactions on 23 (1), 175-182, 2012
872012
Network biology in medicine and beyond
B Zhang, Y Tian, Z Zhang
Circulation: Cardiovascular Genetics 7 (4), 536-547, 2014
662014
Endoplasmic reticulum stress, the unfolded protein response, and gene network modeling in antiestrogen resistant breast cancer
R Clarke, AN Shajahan, Y Wang, JJ Tyson, RB Riggins, LM Weiner, ...
Hormone molecular biology and clinical investigation 5 (1), 35-44, 2011
642011
Learning structural changes of Gaussian graphical models in controlled experiments
B Zhang, Y Wang
arXiv preprint arXiv:1203.3532, 2012
632012
Reproducibility of differential proteomic technologies in CPTAC fractionated xenografts
DL Tabb, X Wang, SA Carr, KR Clauser, P Mertins, MC Chambers, ...
Journal of proteome research 15 (3), 691-706, 2016
542016
DDN: a caBIG® analytical tool for differential network analysis
B Zhang, Y Tian, L Jin, H Li, IM Shih, S Madhavan, R Clarke, EP Hoffman, ...
Bioinformatics 27 (7), 1036-1038, 2011
492011
Clinical proteomic tumor analysis consortium. Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983, 2019
402019
Glycoproteins identified from heart failure and treatment models
S Yang, L Chen, S Sun, P Shah, W Yang, B Zhang, Z Zhang, DW Chan, ...
Proteomics 15 (2-3), 567-579, 2015
392015
BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data
G Yu, B Zhang, GS Bova, J Xu, IM Shih, Y Wang
Bioinformatics 27 (11), 1473-1480, 2011
362011
Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks
Y Tian, B Zhang, EP Hoffman, R Clarke, Z Zhang, IM Shih, J Xuan, ...
BMC systems biology 8, 1-12, 2014
342014
Chaotic secure communication based on particle filtering
B Zhang, M Chen, D Zhou
Chaos, Solitons & Fractals 30 (5), 1273-1280, 2006
342006
Particle-filter-based estimation and prediction of chaotic states
B Zhang, M Chen, D Zhou, Z Li
Chaos, Solitons & Fractals 32 (4), 1491-1498, 2007
302007
Tissue proteomics using chemical immobilization and mass spectrometry
P Shah, B Zhang, C Choi, S Yang, J Zhou, R Harlan, Y Tian, Z Zhang, ...
Analytical biochemistry 469, 27-33, 2015
272015
Proteome-wide tyrosine phosphorylation analysis reveals dysregulated signaling pathways in ovarian tumors*[S]
G Song, L Chen, B Zhang, Q Song, Y Yu, C Moore, TL Wang, IM Shih, ...
Molecular & Cellular Proteomics 18 (3), 448-460, 2019
242019
KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring
Y Tian, B Zhang, EP Hoffman, R Clarke, Z Zhang, IM Shih, J Xuan, ...
Bioinformatics 31 (2), 287-289, 2015
222015
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