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MetaboAnalyst 5.0: narrowing the gap between raw spectra and functional insights Z Pang, J Chong, G Zhou, DA de Lima Morais, L Chang, M Barrette, ... Nucleic acids research 49 (W1), W388-W396, 2021 | 3237 | 2021 |
Predicting network activity from high throughput metabolomics S Li, Y Park, S Duraisingham, FH Strobel, N Khan, QA Soltow, DP Jones, ... PLoS computational biology 9 (7), e1003123, 2013 | 911 | 2013 |
Systems biology of vaccination for seasonal influenza in humans HI Nakaya, J Wrammert, EK Lee, L Racioppi, S Marie-Kunze, WN Haining, ... Nature immunology 12 (8), 786-795, 2011 | 894 | 2011 |
Molecular signatures of antibody responses derived from a systems biology study of five human vaccines S Li, N Rouphael, S Duraisingham, S Romero-Steiner, S Presnell, ... Nature immunology 15 (2), 195-204, 2014 | 770 | 2014 |
Antibiotics-driven gut microbiome perturbation alters immunity to vaccines in humans T Hagan, M Cortese, N Rouphael, C Boudreau, C Linde, MS Maddur, ... Cell 178 (6), 1313-1328. e13, 2019 | 515 | 2019 |
MetaboAnalystR 3.0: toward an optimized workflow for global metabolomics Z Pang, J Chong, S Li, J Xia Metabolites 10 (5), 186, 2020 | 484 | 2020 |
Autophagy is essential for effector CD8+ T cell survival and memory formation X Xu, K Araki, S Li, JH Han, L Ye, WG Tan, BT Konieczny, MW Bruinsma, ... Nature immunology 15 (12), 1152-1161, 2014 | 442 | 2014 |
Systems vaccinology B Pulendran, S Li, HI Nakaya Immunity 33 (4), 516-529, 2010 | 426 | 2010 |
One step forward for reducing false positive and false negative compound identifications from mass spectrometry metabolomics data: new algorithms for constructing extracted ion … OD Myers, SJ Sumner, S Li, S Barnes, X Du Analytical chemistry 89 (17), 8696-8703, 2017 | 382 | 2017 |
The amino acid sensor GCN2 controls gut inflammation by inhibiting inflammasome activation PB Ravindran R, Loebbermann J, Nakaya HI, Khan N, Ma H, Gama L, Machiah DK ... Nature 531 (7595), 523-7, 2016 | 273 | 2016 |
Metabolic phenotypes of response to vaccination in humans S Li, NL Sullivan, N Rouphael, T Yu, S Banton, MS Maddur, ... Cell 169 (5), 862-877. e17, 2017 | 266 | 2017 |
Computational metabolomics: a framework for the million metabolome K Uppal, DI Walker, K Liu, S Li, YM Go, DP Jones Chemical research in toxicology 29 (12), 1956-1975, 2016 | 235 | 2016 |
Vaccine activation of the nutrient sensor GCN2 in dendritic cells enhances antigen presentation R Ravindran, N Khan, HI Nakaya, S Li, J Loebbermann, MS Maddur, ... Science 343 (6168), 313-317, 2014 | 234 | 2014 |
MetaboAnalyst 6.0: towards a unified platform for metabolomics data processing, analysis and interpretation Z Pang, Y Lu, G Zhou, F Hui, L Xu, C Viau, AF Spigelman, PE MacDonald, ... Nucleic Acids Research, gkae253, 2024 | 191 | 2024 |
Detailed investigation and comparison of the XCMS and MZmine 2 chromatogram construction and chromatographic peak detection methods for preprocessing mass spectrometry … OD Myers, SJ Sumner, S Li, S Barnes, X Du Analytical Chemistry 89 (17), 8689-8695, 2017 | 183 | 2017 |
Effects of age, sex, and genotype on high‐sensitivity metabolomic profiles in the fruit fly, Drosophila melanogaster JM Hoffman, QA Soltow, S Li, A Sidik, DP Jones, DEL Promislow Aging Cell 13 (4), 596-604, 2014 | 137 | 2014 |
Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data S Barnes, HP Benton, K Casazza, SJ Cooper, X Cui, X Du, J Engler, ... Journal of Mass Spectrometry 51 (7), 461-475, 2016 | 119 | 2016 |
mTOR regulates metabolic adaptation of APCs in the lung and controls the outcome of allergic inflammation C Sinclair, G Bommakanti, L Gardinassi, J Loebbermann, MJ Johnson, ... Science 357 (6355), 1014-1021, 2017 | 116 | 2017 |
Amino Acid Metabolism is Altered in Adolescents with Nonalcoholic Fatty Liver Disease-An Untargeted, High Resolution Metabolomics Study VMB Jin R, Banton S, Tran VT, Konomi JV, Li S, Jones DP J Pediatr., 2016 | 101 | 2016 |