| Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans TD Querec, RS Akondy, EK Lee, W Cao, HI Nakaya, D Teuwen, A Pirani, ... Nature immunology 10 (1), 116-125, 2009 | 1266 | 2009 |
| Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4 M Gilchrist, V Thorsson, B Li, AG Rust, M Korb, K Kennedy, T Hai, ... Nature 441 (7090), 173-178, 2006 | 900 | 2006 |
| Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry F Desiere, EW Deutsch, AI Nesvizhskii, P Mallick, NL King, JK Eng, ... Genome biology 6 (1), R9, 2004 | 378 | 2004 |
| Function of C/EBPδ in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals V Litvak, SA Ramsey, AG Rust, DE Zak, KA Kennedy, AE Lampano, ... Nature immunology 10 (4), 437-443, 2009 | 336 | 2009 |
| Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics SA Ramsey, SL Klemm, DE Zak, KA Kennedy, V Thorsson, B Li, ... PLoS computational biology 4 (3), e1000021, 2008 | 231 | 2008 |
| Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites SA Ramsey, TA Knijnenburg, KA Kennedy, DE Zak, M Gilchrist, ES Gold, ... Bioinformatics 26 (17), 2071-2075, 2010 | 92 | 2010 |
| Control of parasitophorous vacuole expansion by LYST/Beige restricts the intracellular growth of Leishmania amazonensis J Wilson, C Huynh, KA Kennedy, DM Ward, J Kaplan, A Aderem, ... PLoS pathogens 4 (10), e1000179, 2008 | 82 | 2008 |
| Systems analysis identifies an essential role for SHANK-associated RH domain-interacting protein (SHARPIN) in macrophage Toll-like receptor 2 (TLR2) responses DE Zak, F Schmitz, ES Gold, AH Diercks, JJ Peschon, JS Valvo, ... Proceedings of the National Academy of Sciences 108 (28), 11536-11541, 2011 | 80 | 2011 |
| Leishmania promotes its own virulence by inducing expression of the host immune inhibitory ligand CD200 M Cortez, C Huynh, MC Fernandes, KA Kennedy, A Aderem, ... Cell host & microbe 9 (6), 463-471, 2011 | 69 | 2011 |
| A new triggering receptor expressed on myeloid cells (Trem) family member, Trem-like 4, binds to dead cells and is a DNAX activation protein 12-linked marker for subsets of … H Hemmi, J Idoyaga, K Suda, N Suda, K Kennedy, M Noda, A Aderem, ... The Journal of Immunology 182 (3), 1278-1286, 2009 | 63 | 2009 |
| MalK Forms a Dimer Independent of Its Assembly into the MalFGK2 ATP-binding Cassette Transporter ofEscherichia coli KA Kennedy, B Traxler Journal of Biological Chemistry 274 (10), 6259-6264, 1999 | 55 | 1999 |
| Workshop on in vitro neutralization of Chlamydia trachomatis: summary of proceedings GI Byrne, RS Stephens, G Ada, HD Caldwell, H Su, RP Morrison, ... Journal of Infectious Diseases 168 (2), 415-420, 1993 | 49 | 1993 |
| The innate immune database (IIDB) M Korb, AG Rust, V Thorsson, C Battail, B Li, D Hwang, KA Kennedy, ... BMC immunology 9 (1), 7, 2008 | 44 | 2008 |
| Multiscale representation of genomic signals TA Knijnenburg, SA Ramsey, BP Berman, KA Kennedy, AFA Smit, ... Nature methods 11 (6), 689, 2014 | 36 | 2014 |
| Eukaryotic cell uptake of heparin-coated microspheres: a model of host cell invasion by Chlamydia trachomatis RS Stephens, FS Fawaz, KA Kennedy, K Koshiyama, B Nichols, ... Infection and immunity 68 (3), 1080-1085, 2000 | 36 | 2000 |
| Evidence for multiple pathways in the assembly of the Escherichia coli maltose transport complex KA Kennedy, EG Gachelet, B Traxler Journal of Biological Chemistry 279 (32), 33290-33297, 2004 | 23 | 2004 |
| Identifying novel transcription factors involved in the inflammatory response by using binding site motif scanning in genomic regions defined by histone acetylation PS Askovich, SA Ramsey, AH Diercks, KA Kennedy, TA Knijnenburg, A Aderem PLoS One 12 (9), e0184850, 2017 | 6 | 2017 |
| Application of systems biology to identify predictors of HIV vaccine immunogenicity D Zak, J Kupko, E Andersen-Nissen, H Park, S Hansen, K Mullen, ... AIDS RESEARCH AND HUMAN RETROVIRUSES 24, 28-28, 2008 | | 2008 |
| Assembly of the maltose transport complex of Escherichia coli and the dimerization, localization, and functional domain structure of its ATP-binding subunit, MalK KA Kennedy University of Washington, 1999 | | 1999 |
